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|
CC = cc
SRC = ../src
LIB = ../lib
CPPFLAGS += -I ../include/ -I $(SRC)/
#CFLAGS += -g -Wall -Werror -Wpedantic -std=c99
CFLAGS += -g -Wall -Werror -std=gnu99
LDFLAGS += $(LIB)/libslow5.a -lm -lz -lstreamvbyte
ifeq ($(zstd),1)
CFLAGS += -DSLOW5_USE_ZSTD
LDFLAGS += -lzstd
endif
BIN_DIR = bin
TESTS = $(BIN_DIR)/endian_test \
$(BIN_DIR)/unit_test_helpers \
$(BIN_DIR)/unit_test_press \
$(BIN_DIR)/unit_test_ascii \
$(BIN_DIR)/unit_test_binary \
$(BIN_DIR)/convert_slow5_test \
$(BIN_DIR)/unit_test_two_rg \
$(BIN_DIR)/unit_test_lossless \
$(BIN_DIR)/unit_test_empty \
$(BIN_DIR)/unit_test_enum
all: $(BIN_DIR) $(TESTS)
$(BIN_DIR):
mkdir $@
$(BIN_DIR)/endian_test: endian_test.c
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/unit_test_helpers: unit_test_helpers.c unit_test.h $(LIB)/libslow5.a $(SRC)/slow5_extra.h $(SRC)/slow5_misc.h
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/unit_test_press: unit_test_press.c unit_test.h $(LIB)/libslow5.a
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/unit_test_ascii: unit_test_ascii.c unit_test.h $(LIB)/libslow5.a $(SRC)/slow5_extra.h $(SRC)/slow5_misc.h $(SRC)/slow5_idx.h
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/unit_test_binary: unit_test_binary.c unit_test.h $(LIB)/libslow5.a $(SRC)/slow5_extra.h $(SRC)/slow5_misc.h $(SRC)/slow5_idx.h
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/convert_slow5_test: convert_slow5_test.c unit_test.h $(LIB)/libslow5.a
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/unit_test_two_rg: unit_test_two_rg.c unit_test.h $(LIB)/libslow5.a $(SRC)/slow5_extra.h
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/unit_test_lossless: unit_test_lossless.c unit_test.h $(LIB)/libslow5.a $(SRC)/slow5_extra.h
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/unit_test_empty: unit_test_empty.c unit_test.h $(LIB)/libslow5.a $(SRC)/slow5_extra.h
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
$(BIN_DIR)/unit_test_enum: unit_test_enum.c unit_test.h $(LIB)/libslow5.a $(SRC)/slow5_extra.h $(SRC)/slow5_misc.h
$(CC) $(CFLAGS) $(CPPFLAGS) $< -o $@ $(LDFLAGS)
clean:
rm -rf $(TESTS) $(BIN_DIR)
|
