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#!/bin/bash
# customize tests
# Relative path to "slow5/tests/"
REL_PATH="$(dirname $0)/"
FAST5_DIR= #should be absolute or relative to the slow5tools executable
TEMP_DIR= #should be absolute or relative to the slow5tools executable
SLOW5TOOLS=
TEST_DATASET_LINK="https://cloudstor.aarnet.edu.au/plus/s/9afW5kgWy1w8ZpQ/download"
./$REL_PATH/download_test_dataset.sh $FAST5_DIR $TEST_DATASET_LINK
./$REL_PATH/integrity_test.sh $FAST5_DIR $TEMP_DIR $SLOW5TOOLS
./$REL_PATH/test_merge_threads.sh $FAST5_DIR $TEMP_DIR $SLOW5TOOLS
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