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Description: build all libraries
This patch makes sure that also static libraries are built, and that
the correct SONAMEs etc. are used for the shared ones.
Not upstreamed as upstream intends their C source to be inlined with the
code using the functions.
Author: Sascha Steinbiss <sascha@steinbiss.name>
--- a/src/Makefile
+++ b/src/Makefile
@@ -5,26 +5,31 @@
LOBJS = ssw.o
LCPPOBJS = ssw_cpp.o
PROG = ssw_test
-LIB = libssw.so
+SOVERS=.0
+LIB = libssw.so$(SOVERS)
+STATICLIB = libssw.a
EXAMPLE = example_c
EXAMPLE_CPP = example_cpp
JAVA_JAR = ssw.jar
JAVA_LIB = libsswjni.so
-JAVA_INLCUDES = -I"$(JAVA_HOME)/include" -I"$(JAVA_HOME)/include/linux"
-JAVA_OBJ = ssw/Aligner.class ssw/Alignment.class ssw/Example.class
+JAVA_INLCUDES = -I"$(JAVA_HOME)/include" -I"$(JAVA_HOME)/include/linux" -I/usr/lib/jvm/default-java/include/ -I/usr/lib/jvm/default-java/include/linux
+JAVA_OBJ = ssw/Aligner.class ssw/Alignment.class
.PHONY: all default java clean
-default: $(PROG) $(EXAMPLE) $(EXAMPLE_CPP) $(LIB)
+default: $(PROG) $(EXAMPLE) $(EXAMPLE_CPP) $(LIB) $(STATICLIB)
all: default java
java: $(JAVA_JAR) $(JAVA_LIB)
-$(LIB): ssw.c ssw.h
- $(CC) $(CFLAGS) -fPIC -shared -rdynamic -o $@ $<
+$(LIB): ssw.c ssw.h ssw_cpp.h ssw_cpp.cpp
+ $(CXX) $(CPPFLAGS) $(CXXFLAGS) -fPIC -shared -rdynamic -Wl,-soname,$(LIB) -o $@ $^
-$(PROG): main.c kseq.h
+$(STATICLIB): $(LOBJS) $(LCPPOBJS)
+ ar rcs $@ $^
+
+$(PROG): main.c kseq.h $(LIB) $(STATICLIB)
$(EXAMPLE): example.c
@@ -38,10 +43,10 @@
$(CC) $(CFLAGS) $(JAVA_INLCUDES) -fPIC -shared -rdynamic -o $@ $< ssw.c
$(JAVA_JAR): $(JAVA_OBJ)
- jar cvfe $@ ssw.Example $^
+ jar cvf $@ $^
%.class: %.java
- javac -cp ./ $<
+ javac $<
ssw.o: ssw.c ssw.h
$(CC) -c -o $@ $< $(CFLAGS)
@@ -50,4 +55,4 @@
$(CXX) -c -o $@ $< $(CXXFLAGS)
clean:
- -rm -f $(LOBJS) $(LCPPOBJS) $(PROG) $(LIB) $(EXAMPLE) $(EXAMPLE_CPP) $(JAVA_LIB) $(JAVA_JAR) $(JAVA_OBJ) *~
+ -rm -f $(LOBJS) $(LCPPOBJS) $(PROG) $(LIB) $(EXAMPLE) $(EXAMPLE_CPP) $(JAVA_LIB) *.jar $(JAVA_OBJ) *~ $(STATICLIB)
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