File: testSamSOcoord.sam

package info (click to toggle)
libstatgen 1.0.15-8
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 4,588 kB
  • sloc: cpp: 49,624; ansic: 1,408; makefile: 320; sh: 60
file content (34 lines) | stat: -rw-r--r-- 1,216 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
@HD	SO:coordinate	VN:1.0
@SQ	SN:1	LN:247249719
@SQ	SN:2	LN:242951149
@SQ	SN:3	LN:199501827
@SQ	SN:4	LN:191273063
@SQ	SN:5	LN:180857866
@SQ	SN:6	LN:170899992
@SQ	SN:7	LN:158821424
@SQ	SN:8	LN:146274826
@SQ	SN:9	LN:140273252
@SQ	SN:10	LN:135374737
@SQ	SN:11	LN:134452384
@SQ	SN:12	LN:132349534
@SQ	SN:13	LN:114142980
@SQ	SN:14	LN:106368585
@SQ	SN:15	LN:100338915
@SQ	SN:16	LN:88827254
@SQ	SN:17	LN:78774742
@SQ	SN:18	LN:76117153
@SQ	SN:19	LN:63811651
@SQ	SN:20	LN:62435964
@SQ	SN:21	LN:46944323
@SQ	SN:22	LN:49691432
@SQ	SN:X	LN:154913754
1:1011:F:255+17M15D20M	73	1	1011	0	5M2D	=	1011	0	CCGAA	6>6+4	XT:A:R	AM:i:0	NM:i:0	MD:Z:37
1:1011:F:255+17M15D20M	133	1	1012	0	*	=	1011	0	CTGT	>>9>
18:462+29M5I3M:F:295	97	1	75	0	5M	18	757	0	ACGTN	;>>>>	XT:A:R	AM:i:0	NM:i:2	MD:Z:30A0C5
18:462+29M5I3M:F:295	97	1	75	0	*	18	757	0	*	*	AM:i:0
18:462+29M5I3M:F:295	97	2	75	0	5M	18	757	0	ACGTN	*	XT:A:R	AM:i:0	NM:i:2	MD:Z:30A0C5
18:462+29M5I3M:F:296	97	1	1751	0	3S2H5M	18	757	0	TGCACGTN	453;>>>>
18:462+29M5I3M:F:297	97	2	1751	0	3S5M1S3H	18	757	0	TGCACGTNG	453;>>>>5
Y:16597235+13M13I11M:F:181	141	*	0	0	*	*	0	0	AACT	==;;
18:462+29M5I3M:F:298	97	3	75	0	3S5M4H	18	757	0	TGCACGTN	453;>>>>
Y:16597235+13M13I11M:F:181	141	*	0	0	*	*	0	0	*	*