1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
|
/*
* Copyright (C) 2012 Regents of the University of Michigan
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU General Public License for more details.
*
* You should have received a copy of the GNU General Public License
* along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
#include "BaseUtilitiesTest.h"
#include <assert.h>
#include <iostream>
int main(int argc, char ** argv)
{
testReverseComplement();
}
void testReverseComplement()
{
// Test odd number of bases.
std::string testString = "ACGTAACCTTGGG";
std::string expectedReverse = "CCCAAGGTTACGT";
BaseUtilities::reverseComplement(testString);
assert(testString == expectedReverse);
// Test even number of bases.
testString = "ACGTAACCTGGG";
expectedReverse = "CCCAGGTTACGT";
BaseUtilities::reverseComplement(testString);
assert(testString == expectedReverse);
}
|
