1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27
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##fileformat=VCFv4.0
##filedate=20110211
##source=glfMultiples
##minDepth=2526
##maxDepth=2526000
##minMapQuality=0
##minPosterior=0.5000
##contig=<ID=1,length=62435964,assembly=B36,md5=f126cdf8a6e0c7f379d618ff66beb2da,species="Homo sapiens",taxonomy=x>
##INFO=<ID=DP,Number=1,Type=Integer,Description="Total Depth">
##INFO=<ID=MQ,Number=1,Type=Integer,Description="Root Mean Squared Mapping Quality">
##INFO=<ID=NS,Number=1,Type=Integer,Description="Number of samples with coverage">
##INFO=<ID=AN,Number=1,Type=Integer,Description="Total number of alleles (with coverage)">
##INFO=<ID=AC,Number=.,Type=Integer,Description="Alternative allele count (with coverage)">
##INFO=<ID=AF,Number=.,Type=Float,Description="Alternate allele frequency">
##INFO=<ID=AB,Number=1,Type=Float,Description="Estimated allele balance between the alleles">
##FILTER=<ID=dp2526,Description="Total Read Depth less than 2526">
##FILTER=<ID=DP2526000,Description="Total Read Depth greater than 2526000">
##FORMAT=<ID=GT,Number=1,Type=String,Description="Most Likely Genotype">
##FORMAT=<ID=GQ,Number=1,Type=Integer,Description="Genotype Call Quality">
##FORMAT=<ID=DP,Number=1,Type=Integer,Description="Read Depth">
##FORMAT=<ID=GL,Number=3,Type=Integer,"Genotype Likelihoods for Genotypes 0/0,0/1,1/1">
##FORMAT=<ID=GL3,Number=6,Type=Integer,"Genotype Likelihoods for Genotypes 0/0,0/1,1/1,0/2,1/2,2/2">
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT P1 P2 P3 P4 P5 P6
1 32768 r1 A G 100 PASS . GT:DP:GQ:GL 0/1:0:5:0,0,0 1/0:0:5:0,0,0 0/0:0:5:0,0,0 0/1:1:7:19,3,0 0/0:2:11:0,6,22 0/1:1:5:12,3,0
1 65537 r2 T G 100 PASS . GT:DP:GQ:GL 0/0:0:13:0,0,0 0/0:38:100:0,114,226 0/1:1:16:0,3,20 0/0:39:100:0,117,255 0/0:35:100:0,102,255 0/0:29:100:0,87,255
3 32768 r1 GAA G 100 PASS . GT:DP:GQ:GL 0/1:0:5:0,0,0 1/0:0:5:0,0,0 0/0:0:5:0,0,0 0/1:1:7:19,3,0 0/0:2:11:0,6,22 0/1:1:5:12,3,0
3 32780 r2 T G 100 PASS . GT:DP:GQ:GL 0/0:0:13:0,0,0 0/0:38:100:0,114,226 0/1:1:16:0,3,20 0/0:39:100:0,117,255 0/0:35:100:0,102,255 0/0:29:100:0,87,255
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