1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21
|
#!/bin/sh
# autopkgtest check: Build and run a program against libtabixpp
# Author: Sascha Steinbiss <sascha@steinbiss.name>
set -e
SRC=$(pwd)/main.cpp
DATA=$(pwd)/debian/tests/Lmajor.gff3.1
WORKDIR=$(mktemp -d)
trap "rm -rf $WORKDIR" 0 INT QUIT ABRT PIPE TERM
cd $WORKDIR
g++ -O2 -o tabix++2 $SRC -ltabixpp -lhts
[ -x tabix++2 ]
echo "build: OK"
fgrep -v '###' $DATA > ./Lmajor.gff3.1
bgzip Lmajor.gff3.1
tabix -p gff Lmajor.gff3.1.gz
ls
./tabix++2 Lmajor.gff3.1.gz > 1
ldd tabix++2
echo "run: OK"
|