File: test.aln

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CLUSTAL alignment of sequences Human_IR and Mouse_IR


Human_IR             TCAGAGATGTCCACCTGCGCCCTATTCGAGGTCTCCGGCGTCTTCTTTGGCGTCGTCTTT
Mouse_IR             ------------------------------------------------------------
                                                                                 

Human_IR             GCCCTTTCAGAAGCGTCTGCACATTTTTCCAGGTGTCATTTCTCCAACTTGAACACAGGG
Mouse_IR             ------------------------------------------------------------
                                                                                 

Human_IR             AGCGCACTGGGCACGCGGGCACGTGGCTGTCCCCAGGGGCCTGGCTTGGGTCTCGCCCCT
Mouse_IR             ------------------------------------------------------------
                                                                                 

Human_IR             GGGCCGGGGCGCACGCGCGGGCGGGACATCTGGGGGCGCCCACGCGCTCTGGGACGAGTG
Mouse_IR             ------------------------------------------------------------
                                                                                 

Human_IR             TCGCTGGCCAGGCCCGGACTGAGGAAAGGCGAGTGAGACACTACTCGCCTGGGGTGCAAA
Mouse_IR             ------------------------------------------------------------
                                                                                 

Human_IR             ATTTAAGGGAGTGAAAAAAAAAAAAAAAGAAAGAAACCAAAACCACCTCGAGTCACCAAA
Mouse_IR             ------------------------------------------------------------
                                                                                 

Human_IR             ATAAACATTTTAATGCAGTATTTTTTAAAAAATCAACAGGAATCCTCCAAAGCCCACTAT
Mouse_IR             --------------------------------------------CCACGGGAGTCAAAAA
                                                                 *  *      **  * 

Human_IR             GAACAAAATAGCAAAATGGTAGAGAAAGGATCTGTGCCGCTGCGTCGGGCCTGT------
Mouse_IR             AATAGTAAAAAGGAGTAAAGAAAGACAAAATGTGCTTGGTTGAATCTGGCATCTAGGGCA
                      *    ** *   *      * *** *  ** **    * **  ** *** * *      

Human_IR             ------------------------------------------------------------
Mouse_IR             TATTGGGGTGTTTATGTCCTGGGGTATCTGGCGGCATTTCCAGACTTTAAAATTGTTATT
                                                                                 

Human_IR             --G---------------------------------------------------------
Mouse_IR             TCGGGGTAATTTGGGGTGTCTCGCTCTGGCGGAGATCTAGAGTGTGCTCCAGACCTTTAA
                       *                                                         

Human_IR             ------------------------------------------------------------
Mouse_IR             ATTGGAACCTCGGTGTTACTTGTGTTTGCTGCAGTCAGGAGGGGACCTGGGGGCGTCCCT
                                                                                 

Human_IR             ------------------------------------------------------------
Mouse_IR             AGGCTTTTAAACTGGAACCTCAGGCCTGTTTAGTGGTTTTCGAGTCAGGCGGGGATCTGG
                                                                                 

Human_IR             ------------------------------------------------------------
Mouse_IR             GGACCCCTAGGTTTTAAAATCGGAACTTTGGGACTCTTTGGGGGCGTTCGTGTCAGGTGC
                                                                                 

Human_IR             ------GGGCGCCTCCGGGGGTCTGAAACTGGAG--------------------------
Mouse_IR             GGATATGGGCAGCTCCGGACGTTTGACAGGTGAGTCTTAGAGTTGTTTGGGTGTTTATGT
                           ****  ******  ** *** *   ***                          

Human_IR             ------------------------------------------------------------
Mouse_IR             TACACTGGTATCTGAGAACGCTTACAAGCTTTTAAATCGTAATCTTTCTAAGCCAGCAGT
                                                                                 

Human_IR             --------------------------------------------------------GAGA
Mouse_IR             TCGGGGTGTTGGGATTGGAAGAATCTGAAGTGAGCCTCGGGTCTCTGAAGTTGCGGGTTT
                                                                             *   

Human_IR             CTCGGGGCTGTAGGGCGCGCGGATCTGGGGCGCGCCCTCGGTCCCGGCGCGCCCAGGGCC
Mouse_IR             TACGGGGC----------------------------------------------------
                       ******                                                    

Human_IR             TCCCGCGCGGGGCCCGGCACAGGGAGGCGGGGAGGCGGGCGGGGCGGGGCG-----GGAC
Mouse_IR             ----AAGGGGGAAAGGGGCCGAGGAGGCGAGGAGGCGAG-GAGGCGTGGCGTTGCCAGCT
                           * ***    **  *  ******* ******* * * **** ****      *  

Human_IR             CGGGCGGCACCTCCC--TCCCCTGCAAGCTTT----CCCTCCCTCTCC--TGGGCCTCTC
Mouse_IR             CTGGCCACGCCTCCCCGAGCTCTGCTGGCTTTCTCCCCCTCCCCCCCCAGCGGGCCTCAC
                     * ***  * ******    * ****  *****    ******* * **   ******* *

Human_IR             CCGGGCGCAGAGTCCCTTCCTAGGCCAGATCCGCGCCGCCTTTTCCCGCGGCCCGCACGG
Mouse_IR             TGGAGCGCACAGTCCCTTCCCTGTCTTAATCCGCGCCACCTTTTCCCTTGGCCCGCGCGG
                       * ***** **********  * *   ********* *********  ******* ***

Human_IR             GGCCCAGCTGACGGGCCGCGTTGTTTACGGGCCGGAG-C-AGCCCTCTCTCCCGCCGCCC
Mouse_IR             G-CCCAGCTGACGGGCTGCGTTGTTTACGGGCTGGAGTCGAGCCCTAGCTCCCGCCGCC-
                     * ************** *************** **** * ******  *********** 

Human_IR             GCCCGCCACCCGCCAGCCCAGGTGCCCGCCCGCCAGTCAGCTAGTCCGTCGGTCCGCGCG
Mouse_IR             --------ACCACCAGCCCAGGTGCCC--------------------TCCAGTGCGCGCG
                              ** ***************                      * ** ******

Human_IR             TCCCTCTGTCCCGGAGCCCGCAGATCGCGACCCAGAGCGCGCGGGGCCGAGAGCCGAGAG
Mouse_IR             TCCCTCTGTCTCAGACTCCACACAACGCGACCCA--------------------------
                     ********** * **  ** ** * *********                          

Human_IR             ACAGTCCCG----------------------------------------GGCGCAGCGCG
Mouse_IR             ------CCCAGAGCTGCACGGAGGGCAGAAGCAGGAGACCCGGACAGGAGACGCACCGCG
                           **                                         * **** ****

Human_IR             GAG--CTCCGGGCCCCGAGATCCTGGGACGGGGCCCGGGCCGCAGCGGCCGGGGGGTCGG
Mouse_IR             GTGAGCTCTGGACTCTGGGATTGCGGGCAC----------------------------GG
                     * *  *** ** * * * ***   ***                               **

Human_IR             GGCC-------ACCACCGCAAGGGCCTCCGCTCAGTATTTGTAGCTGGCGAAGCCGCGCG
Mouse_IR             GACCGGGCCTGGGTGACCTGCGGGCCGCGCCACGGTGTTGCTTGCGGCCGAGGCCTCT-G
                     * **            *    ***** *  * * ** **  * ** * *** *** *  *

Human_IR             CGCCCTTCCCGGGGCTG-CCTCTGGGCCCTCCCCGGCAGGGGGGCTGCGGCCCGCGGGTC
Mouse_IR             TGCTCTTCCCGGGACTGTCCCCAGGGCCCT-CTAGGCTGGAGAGCTGCGGCCTGTGAGCC
                      ** ********* *** ** * ******* *  *** ** * ********* * * * *

Human_IR             GCGGGCGTGGAAGAGAAGGACGCGCGGCCCCCAGCGCCTCTTGGGTGGCCG-C-CTCGGA
Mouse_IR             ACGGGCGTGGAAGAGAAGGACGTGCGGCCCCGAGCGCCTCTCCAGAGACCTTCTCACGGA
                      ********************* ******** *********   * * **  * * ****

Human_IR             GCATGACCCCCGCGGGCCAGCGCCGCGCGCTCTGATCCGAGGAGACCCCGCGCTCCCGCA
Mouse_IR             GTATGTCCCCAGTAGGCCGGCGTGGCGTGCTCTGATCGCCGGGGTCCCAGCACTCCTACT
                     * *** **** *  **** ***  *** *********   ** * *** ** ****  * 

Human_IR             GCCATGGGCACCGGGGGCCGGCGGGGAG-CGGCGGCCGCGCCGCTGCTGGTGGCGGTGGC
Mouse_IR             GCTATGGGCTTCGGGAGA-GGATGTGAGACGACGGCTGTGCCATTGCTGGTGGCCGTGGC
                     ** ******  **** *  **  * *** ** **** * ***  ********** *****

Human_IR             CGCGCTGCTACTGGGCGCCGCGGGCCACCTGTACCCCGGAGAGGGTGAGTCTGGGGGCGC
Mouse_IR             CGCGTTGCTGGTGGGCACAGCCGGCCACCTGTACCCTGGAGAGGGTAAGTCTGG------
                     **** ****  ***** * ** ************** ********* *******      

Human_IR             GGGCGTGGGCGGGGAGCGCCGCGATGGGGAGAGGACCCCACCCAAGCCAAAATCGATCCC
Mouse_IR             ------------------------------------------------------------
                                                                                 

Human_IR             CCGCTTGTGGACTGAGAACCCTCCCCAGGGGCGGGGGGCGGTGGCCAGGACGGTAGCTCC
Mouse_IR             ------------------------------------------------------------
                                                                                 

Human_IR             TGCATCGCGTAGGGGGAGCGGGAAGC
Mouse_IR             --------------------------