File: coreObject.xml

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libvamsas-client-java 0.2%2Bdfsg-2
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<?xml version="1.0" encoding="UTF-8"?>	
<!--
   * This file is part of the Vamsas Client version 0.2. 
   * Copyright 2010 by Jim Procter, Iain Milne, Pierre Marguerite, 
   *  Andrew Waterhouse and Dominik Lindner.
   * 
   * Earlier versions have also been incorporated into Jalview version 2.4 
   * since 2008, and TOPALi version 2 since 2007.
   * 
   * The Vamsas Client is free software: you can redistribute it and/or modify
   * it under the terms of the GNU Lesser General Public License as published by
   * the Free Software Foundation, either version 3 of the License, or
   * (at your option) any later version.
   *  
   * The Vamsas Client is distributed in the hope that it will be useful,
   * but WITHOUT ANY WARRANTY; without even the implied warranty of
   * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
   * GNU Lesser General Public License for more details.
   * 
   * You should have received a copy of the GNU Lesser General Public License
   * along with the Vamsas Client.  If not, see <http://www.gnu.org/licenses/>.
-->
<VAMSAS xmlns="http://www.vamsas.org" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.vamsas.org
http://www.vamsas.ac.uk/build/VamsasClient/schemas/vamsas.xsd">
	<DataSet>
		<Sequence start="1" end="167" id="a1127235554296">
			<sequence>KTAIITGGSRGIGKSIAIKLGKLGASIVLNYRNNTDALKNTIRELEDLNINVIAVQGDISNYKECEKIIKAALDKFNGIDILVNNAGITADNLILRMKEEEFDKVIETNLKGTFNCVKHCIPMIKRRYGKIINISSVVGVAGNVGQCNYAAAKAGVIGFTKSLAKEL</sequence>
			<name>Q899P0</name>
		</Sequence>
		<Sequence start="1" end="168" id="a1127235554297">
			<sequence>KIAIVTGASSGIGRAIAFKLASRGANLILGDVKIDELRKVAEEIAKETKVKVIPLYVNVGDFNSTKEFYNKGISELGVDYVDILVNNAGINRDALFVKMTYEQWDEVIKVDLYSMFNMTKQVVDMVKRNYGRIINISSLSWLGNIGQANYSAAKAGVIGFTKTLAREL</sequence>
			<name>Q972M3</name>
		</Sequence>
		<Sequence start="1" end="167" id="a1127235554298">
			<sequence>KVIVITGASSGIGEQVAMQVAEQGATPVLMARTEEKLKALADKIKETYNTPCYYYVLDVSEETEVQSVFSKVLQEVGRIDILVNNAGFGIFKTFEDASMDEVKDMFQVNVFGLVACTKAVLPYMVKRNGHIINIASLAGKIATPKSSAYAATKHAVLGFTNSLRMEL</sequence>
			<name>Q81M93</name>
		</Sequence>
		<Sequence start="1" end="167" id="a1127235554299">
			<sequence>KIALVTGAMGGLGTAICQALAKDGCIVAANCLPNFEPAAAWLGQQEALGFKFYVAEGDVSDFESCKAMVAKIEADLGPVDILVNNAGITRDKFFAKMDKAQWDAVIATNLSSLFNVTQQVSPKMERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAEL</sequence>
			<name>NODG_AZOBR</name>
		</Sequence>
		<Sequence start="1" end="166" id="a1127235554300">
			<sequence>QTAVVTGGGKGIGRAICLALAREGADIVIAARTEKDIRETARMVEKEGRKALPVSTDIRVEEDVENMISEAVDAFGRIDILVNNAGVAYRKYMVETSTEEYDNIMDTNLKGMFFCTKYALPYLLKREGRIINISSGAGKHGIPKLSIYSASKFAVIGFTESIAYEI</sequence>
			<name>Q8PS57</name>
		</Sequence>
		<Sequence start="1" end="167" id="a1127235554301">
			<sequence>KTAIVTGAARGIGKAIALKFAAEGANIAFTDLVIDENAEKTRVELEAMGVKAKGYASNAANFEDTAKVVEEIHKDFGRIDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSAFNFIHACTPMMRQKAGSIINMASVVGVHGNAGQANYAASKAGMIALAKSIAQEL</sequence>
			<name>Q8A195</name>
		</Sequence>
		<Sequence start="1" end="164" id="a1127235554302">
			<sequence>KVVVVTGAGSGIGEATAKRFAHEGASVVLVGRNQEKLAKVAAQLKGAEHLIRATDVADLTDVEALFKEVAERFGRLDVLVNNAGVVKSGKVTELGVEDWKAVMSVDLDGVFYCTRTAMPALIASKGNIINVSSVSGLGGDWGMSFYNAAKGAITNFTRALALD</sequence>
			<name>Q888G8</name>
		</Sequence>
		<Sequence start="1" end="164" id="a1127235554303">
			<sequence>KVALVTGAANGIGLAIAERLYQEGATLALADWNEEQLAIVIEQFDSARVYAQKVDVSDPEQVQALVRKTVERFGRLDILVNNAGIHIPGTVLECSVQDWRRIASVNIDGVVYCAMHALPELIKTRGCMVNTASVSGLGGDWGAAFYCATKGAVVNFTRALALD</sequence>
			<name>Q9KRP5</name>
		</Sequence>
		<Sequence start="1" end="163" id="a1127235554304">
			<sequence>KIALVTGASRGIGRAIAELLVERGATVIGTATSEGGAAAISEYLGENGKGLALNVTDVESIEATLKAINDEFGAIDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREV</sequence>
			<name>Q87N22</name>
		</Sequence>
		<Alignment gapChar="-">
			<alignmentSequence start="1" end="167" refid="a1127235554296">
				<sequence>KTAIITGGSRGIGKSIAIKLGKLGASIVLNYRNNTDALKNTIRELEDLN--INVIAVQGDISNYKECEKIIKAALDKFNG--IDILVNNAGITADNLILRMKEEEFDKVIETNLKGTFNCVKHCIPMIKRRYGKIINISSVVGVAGNVGQCNYAAAKAGVIGFTKSLAKEL</sequence>
				<name>Q899P0</name>
			</alignmentSequence>
			<alignmentSequence start="1" end="168" refid="a1127235554297">
				<sequence>KIAIVTGASSGIGRAIAFKLASRGANLILGDVKIDEL--RKVAEEIAKETKVKVIPLYVNVGDFNSTKEFYNKGISELGVDYVDILVNNAGINRDALFVKMTYEQWDEVIKVDLYSMFNMTKQVVDMVKRNYGRIINISSLSWL-GNIGQANYSAAKAGVIGFTKTLAREL</sequence>
				<name>Q972M3</name>
			</alignmentSequence>
			<alignmentSequence start="1" end="167" refid="a1127235554298">
				<sequence>KVIVITGASSGIGEQVAMQVAEQGATPVLMARTEEKL--KALADKIKETYNTPCYYYVLDVSEETEVQSVFSKVLQEVGR--IDILVNNAGFGIFKTFEDASMDEVKDMFQVNVFGLVACTKAVLPYMVKRNGHIINIASLAGKIATPKSSAYAATKHAVLGFTNSLRMEL</sequence>
				<name>Q81M93</name>
			</alignmentSequence>
			<alignmentSequence start="1" end="167" refid="a1127235554299">
				<sequence>KIALVTGAMGGLGTAICQALAKDGCIVAANCLPNFEPAAAWLGQQEALG--FKFYVAEGDVSDFESCKAMVAKIEADLGP--VDILVNNAGITRDKFFAKMDKAQWDAVIATNLSSLFNVTQQVSPKMERGWGRIINISSVNGVKGQAGQTNYSAAKAGVIGFTKALAAEL</sequence>
				<name>NODG_AZOBR</name>
			</alignmentSequence>
			<alignmentSequence start="1" end="166" refid="a1127235554300">
				<sequence>QTAVVTGGGKGIGRAICLALAREGADIVIAARTEKDI--RETARMVEKEG-RKALPVSTDIRVEEDVENMISEAVDAFGR--IDILVNNAGVAYRKYMVETSTEEYDNIMDTNLKGMFFCTKYALPYLLKREGRIINISSGAGKHGIPKLSIYSASKFAVIGFTESIAYEI</sequence>
				<name>Q8PS57</name>
			</alignmentSequence>
			<alignmentSequence start="1" end="167" refid="a1127235554301">
				<sequence>KTAIVTGAARGIGKAIALKFAAEGANIAFTDLVIDENAEKTRVELEAMG--VKAKGYASNAANFEDTAKVVEEIHKDFGR--IDILVNNAGITRDGLMMRMSEQQWDMVINVNLKSAFNFIHACTPMMRQKAGSIINMASVVGVHGNAGQANYAASKAGMIALAKSIAQEL</sequence>
				<name>Q8A195</name>
			</alignmentSequence>
			<alignmentSequence start="1" end="164" refid="a1127235554302">
				<sequence>KVVVVTGAGSGIGEATAKRFAHEGASVVLVGRNQEKL--AKVAAQLKG---AEHLIRATDVADLTDVEALFKEVAERFGR--LDVLVNNAGVVKSGKVTELGVEDWKAVMSVDLDGVFYCTRTAMPALIASKGNIINVSSVSGLGGDWGMSFYNAAKGAITNFTRALALD-</sequence>
				<name>Q888G8</name>
			</alignmentSequence>
			<alignmentSequence start="1" end="164" refid="a1127235554303">
				<sequence>KVALVTGAANGIGLAIAERLYQEGATLALADWNEEQL--AIVIEQFDS---ARVYAQKVDVSDPEQVQALVRKTVERFGR--LDILVNNAGIHIPGTVLECSVQDWRRIASVNIDGVVYCAMHALPELIKTRGCMVNTASVSGLGGDWGAAFYCATKGAVVNFTRALALD-</sequence>
				<name>Q9KRP5</name>
			</alignmentSequence>
			<alignmentSequence start="1" end="163" refid="a1127235554304">
				<sequence>KIALVTGASRGIGRAIAELLVERGATVIGTATSEGGA--AAISEYLG----ENGKGLALNVTDVESIEATLKAINDEFGA--IDILVNNAGITRDNLLMRMKDDEWNDIINTNLTPIYRMSKAVLRMMKKRAGRIINVGSVVGTMGNAGQTNYAAAKAGVIGFTKSMAREV</sequence>
				<name>Q87N22</name>
			</alignmentSequence>
			<Provenance>
				<entry>
					<User>jim</User>
					<Action>edited</Action>
					<Date>2005-12-21</Date>
				</entry>
			</Provenance>
		</Alignment>
		<Provenance>
			<entry>
				<User>jim</User>
				<Action>edited</Action>
				<Date>2005-11-21</Date>
			</entry>
		</Provenance>
	</DataSet>
</VAMSAS>