File: bed2region

package info (click to toggle)
libvcflib 1.0.0~rc2%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 51,048 kB
  • sloc: cpp: 30,004; perl: 474; sh: 247; makefile: 206; python: 200; ansic: 148
file content (9 lines) | stat: -rwxr-xr-x 175 bytes parent folder | download
1
2
3
4
5
6
7
8
9
#!/usr/bin/env perl

while (<STDIN>) {
    $_ =~ /^(.+?)\s(.+?)\s(.+)\s*/;
    $chrom = $1;
    $pos = $2;
    $end = $3;
    print $chrom . ":" . $pos . "-" . $end . "\n";
}