1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68
|
% VCFINFOSUMMARIZE(1) vcfinfosummarize (vcflib) | vcfinfosummarize (VCF transformation)
% Erik Garrison and vcflib contributors
# NAME
**vcfinfosummarize**
# SYNOPSIS
**vcfinfosummarize** [options] <vcf file>
# DESCRIPTION
Take annotations given in the per-sample fields and add the mean, median, min, or max to the site-level INFO.
# OPTIONS
```
options:
-f, --field Summarize this field in the INFO column
-i, --info Store the computed statistic in this info field
-a, --average Take the mean for field (default)
-m, --median Use the median
-n, --min Use the min
-x, --max Use the max
-h, --help Print this message
-v, --version Print version
```
# EXIT VALUES
**0**
: Success
**not 0**
: Failure
# SEE ALSO
[vcflib](./vcflib.md)(1)
# OTHER
## Source code
[vcfinfosummarize.cpp](https://github.com/vcflib/vcflib/blob/master/src/vcfinfosummarize.cpp)
# LICENSE
Copyright 2011-2024 (C) Erik Garrison and vcflib contributors. MIT licensed.
Copyright 2020-2024 (C) Pjotr Prins.
<!--
Created with ./scripts/bin2md.rb scripts/bin2md-template.erb
-->
|