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.TH "VCFNULLDOTSLASHDOT" "1" "" "vcfnulldotslashdot" "Convert VCF . to ./."
.hy
.SH NAME
.PP
vcfnulldotslashdot converts single dots to ./.
.PP
This is useful for some downstream analysis tools.
.SH SYNOPSIS
.PP
\f[B]vcf2tsv\f[R] < \f[I]file\f[R]
.SH DESCRIPTION
.PP
vcfnulldotslashdot converts single dots to ./.
.PP
This is useful for some downstream analysis tools.
.SH EXIT VALUES
.TP
\f[B]0\f[R]
Success
.TP
\f[B]not 0\f[R]
Failure
.SH EXAMPLES
.PP
vcf2tsv converts a VCF to VCF
.IP
.nf
\f[C]
>>> cat(\[dq]../scripts/vcfnulldotslashdot data/issue_307_vcfnulldotslashdot.vcf\[dq])
##fileformat=VCFv4.1
##fileDate=20210209
##source=freeBayes v0.9.21
##reference=ahy.fa
##phasing=none
##filter=\[dq]TYPE = snp & QUAL > 30 & AF > 0.05 & AF < 0.95 genotypes filtered with: GQ > 20\[dq]
##INFO=<ID=AC,Number=A,Type=Integer,Description=\[dq]Total number of alternate alleles in called genotypes\[dq]>
##INFO=<ID=AF,Number=A,Type=Float,Description=\[dq]Estimated allele frequency in the range (0,1]\[dq]>
##INFO=<ID=TYPE,Number=A,Type=String,Description=\[dq]The type of allele, either snp, mnp, ins, del, or complex.\[dq]>
##INFO=<ID=LEN,Number=A,Type=Integer,Description=\[dq]allele length\[dq]>
##FORMAT=<ID=GT,Number=1,Type=String,Description=\[dq]Genotype\[dq]>
#CHROM POS ID REF ALT QUAL FILTER INFO FORMAT rab-field.AH13
contig71493_103113 50 . G A 79.0603 . AC=5;AF=0.078125;LEN=1;TYPE=snp GT ./.:0,0,0
\f[R]
.fi
.SH LICENSE
.PP
Copyright 2021 (C) Erik Garrison and vcflib contributors.
MIT licensed.
.SH AUTHORS
Erik Garrison and other vcflib contributors.
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