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libvcflib 1.0.12%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 70,520 kB
  • sloc: cpp: 39,837; python: 532; perl: 474; ansic: 317; ruby: 295; sh: 254; lisp: 148; makefile: 123; javascript: 94

Folder: scripts

d .. (parent)
- - rwxr-xr-x 427 bed2region
- - rwxr-xr-x 295 bgziptabix
- - rwxr-xr-x 547 plotBfst.R
- - rwxr-xr-x 592 plotHapLrt.R
- - rwxr-xr-x 664 plotHaplotypes.R
- - rwxr-xr-x 526 plotPfst.R
- - rwxr-xr-x 1,358 plotSmoothed.R
- - rwxr-xr-x 499 plotWCfst.R
- - rwxr-xr-x 490 plotXPEHH.R
- - rwxr-xr-x 6,014 plot_roc.r
- - rwxr-xr-x 466 vcf2bed.py
- - rwxr-xr-x 3,677 vcf2sqlite.py
- - rwxr-xr-x 280 vcf_strip_extra_headers
- - rwxr-xr-x 413 vcfbiallelic
- - rwxr-xr-x 243 vcfclearid
- - rwxr-xr-x 245 vcfclearinfo
- - rwxr-xr-x 555 vcfcomplex
- - rwxr-xr-x 336 vcffirstheader
- - rwxr-xr-x 414 vcfgtcompare.sh
- - rwxr-xr-x 1,789 vcfindelproximity
- - rwxr-xr-x 518 vcfindels
- - rwxr-xr-x 1,209 vcfjoincalls
- - rwxr-xr-x 419 vcfmultiallelic
- - rwxr-xr-x 467 vcfmultiway
- - rwxr-xr-x 805 vcfmultiwayscripts
- - rwxr-xr-x 649 vcfnobiallelicsnps
- - rwxr-xr-x 444 vcfnoindels
- - rwxr-xr-x 534 vcfnosnps
- - rwxr-xr-x 742 vcfnulldotslashdot
- - rwxr-xr-x 22,090 vcfplotaltdiscrepancy.r
- - rwxr-xr-x 209 vcfplotaltdiscrepancy.sh
- - rwxr-xr-x 3,970 vcfplotsitediscrepancy.r
- - rwxr-xr-x 180 vcfplottstv.sh
- - rwxr-xr-x 1,881 vcfprintaltdiscrepancy.r
- - rwxr-xr-x 528 vcfprintaltdiscrepancy.sh
- - rwxr-xr-x 705 vcfqualfilter
- - rwxr-xr-x 912 vcfregionreduce
- - rwxr-xr-x 1,015 vcfregionreduce_and_cut
- - rwxr-xr-x 818 vcfregionreduce_pipe
- - rwxr-xr-x 860 vcfregionreduce_uncompressed
- - rwxr-xr-x 597 vcfremovenonATGC
- - rwxr-xr-x 535 vcfsnps
- - rwxr-xr-x 113 vcfsort
- - rwxr-xr-x 5,490 vcfvarstats