File: vcf_strip_extra_headers

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libvcflib 1.0.12%2Bdfsg-1
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#!/usr/bin/env perl
# Strip headers

my $seen_non_header = 0;

while (<STDIN>) {
    if (! $seen_non_header) {
        if (/^#/) {
        } else {
            $seen_non_header = 1;
        }
        print;
    } else {
        if (! /^#/) {
            print;
        }
    }

}