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.\" Automatically generated by Pandoc 2.7.3
.\"
.TH "VCFGENOTYPECOMPARE" "1" "" "vcfgenotypecompare (vcflib)" "vcfgenotypecompare
(VCF statistics)"
.hy
.SH NAME
.PP
\f[B]vcfgenotypecompare\f[R]
.SH SYNOPSIS
.PP
\f[B]vcfgenotypecompare\f[R]
.SH DESCRIPTION
.PP
adds statistics to the INFO field of the vcf file describing the amount
of discrepancy between the genotypes (GT) in the vcf file and the
genotypes reported in the .
use this after vcfannotategenotypes to get correspondence statistics for
two vcfs.
.SH OPTIONS
.IP
.nf
\f[C]
Type: statistics
\f[R]
.fi
.SH EXIT VALUES
.TP
.B \f[B]0\f[R]
Success
.TP
.B \f[B]not 0\f[R]
Failure
.SH SEE ALSO
.PP
\f[B]vcflib\f[R](1)
.SH OTHER
.SH LICENSE
.PP
Copyright 2011-2020 (C) Erik Garrison and vcflib contributors.
MIT licensed.
.SH AUTHORS
Erik Garrison and vcflib contributors.
|
