1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64
|
% VCFGLBOUND(1) vcfglbound (vcflib) | vcfglbound (VCF transformation)
% Erik Garrison and vcflib contributors
# NAME
**vcfglbound**
# SYNOPSIS
**vcfglbound** [options] <vcf file>
# DESCRIPTION
Adjust GLs so that the maximum GL is 0 by dividing all GLs for each sample by the max.
# OPTIONS
```
Then cap (bound) at N (e.g. -10).options:
-b, --bound N Bound GLs to this limit.
-x, --exclude-broken If GLs are > 0, remove site.
Type: transformation
```
# EXIT VALUES
**0**
: Success
**not 0**
: Failure
# SEE ALSO
[vcflib](./vcflib.md)(1)
# OTHER
## Source code
[vcfglbound.cpp](https://github.com/vcflib/vcflib/blob/master/src/vcfglbound.cpp)
# LICENSE
Copyright 2011-2022 (C) Erik Garrison and vcflib contributors. MIT licensed.
<!--
Created with ./scripts/bin2md.rb scripts/bin2md-template.erb
-->
|