File: vcfclearid

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libvcflib 1.0.3%2Bdfsg-2
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#!/usr/bin/env python3
# Clear ID field
#
import sys

for line in sys.stdin:
    if line.startswith("#"):
        print(line.strip())
    else:
        fields = line.strip().split("\t")
        fields[2] = "."
        print("\t".join(fields))