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######################################
# Makefile written by Zev Kronenberg #
# zev.kronenberg@gmail.com #
######################################
CC=gcc
CXX=g++
CFLAGS=-Wall -std=c++0x
INCLUDE=-I../src -I../googletest/googletest/include/ -I../fastahack -I../smithwaterman/ -I../multichoose/ -I../filevercmp/ -I../googletest/googletest/make/
LIB=-L../obj-$(shell dpkg-architecture -qDEB_HOST_GNU_TYPE)/ -L../googletest/googletest/make/ -lm -ltabixpp -lhts -lpthread
LIBGTEST=-lgtest_main -lgtest
LIBVCF=-lvcflib
all: run
tests/main:
$(CXX) $(CFLAGS) $(INCLUDE) tests/mainTest.cpp -o tests/main $(LIBVCF) $(LIBGTEST) $(LIB)
run: tests/main
./tests/main
clean:
rm -f tests/main
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