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# Libxc
Libxc is a library of exchange-correlation functionals for
density-functional theory. The aim is to provide a portable, well
tested and reliable set of exchange and correlation functionals that
can be used by a variety of programs.
Libxc is free software. It is distributed under the Mozilla Public
License, version 2.0, see https://www.mozilla.org/en-US/MPL/2.0/.
For more information, please check the manual at
http://www.tddft.org/programs/Libxc
## CITATION
To cite Libxc, the up-to-date reference is
Susi Lehtola, Conrad Steigemann, Micael J.T. Oliveira, and Miguel
A.L. Marques, Recent developments in Libxc - A comprehensive library
of functionals for density functional theory, Software X 7, 1 (2018).
doi: 10.1016/j.softx.2017.11.002
The reference for older versions of libxc, before the switch to Maple
in version 4 (released in 2017), is
Miguel A. L. Marques, Micael J. T. Oliveira, and Tobias Burnus, Libxc:
a library of exchange and correlation functionals for density
functional theory, Comput. Phys. Commun. 183, 2272 (2012).
doi: 10.1016/j.cpc.2012.05.007
## INSTALLATION
### Autotools
The recommended way to install the library is by using GNU Autotools.
To install the library, just use the standard procedure:
```
./configure --prefix=PATH/TO/LIBXC
make
make check
make install
```
If you're not using a stable release tarball, you'll first need to
generate ```configure``` with ```autoreconf -i```.
### CMake
Support for CMake has also been recently contributed by Lori Burns.
The CMake file has the following caveats
* tested on Linux and Mac, static and shared lib, namespaced and non-namespaced headers, but really only to the extent that it works for Psi4
* all the fancy libtool options and Fortran interface _not_ tested
* test suite executed after build via `ctest`. But it has always totally passed or totally failed, which doesn't inspire confidence
* The generated `libxc_docs.txt` is large, and the generation step sometimes balks on it, leading to `xc_funcs.h` not found errors. Just execute again.
#### Building with CMake
Use the following procedure:
```bash
cmake -H. -Bobjdir
cd objdir && make
make test
make install
```
The build is also responsive to
* static/shared toggle `BUILD_SHARED_LIBS`
* install location `CMAKE_INSTALL_PREFIX`
* namespacing of headers `NAMESPACE_INSTALL_INCLUDEDIR`
* of course, `CMAKE_C_COMPILER`, `BUILD_TESTING`, and `CMAKE_C_FLAGS`
See [CMakeLists.txt](CMakeLists.txt) for options details. All these build options should be passed as `cmake -DOPTION`.
#### Detecting with CMake
CMake builds install with `LibxcConfig.cmake`, `LibxcConfigVersion.cmake`, and `LibxcTargets.cmake` files suitable for use with CMake [`find_package()`](https://cmake.org/cmake/help/v3.2/command/find_package.html) in `CONFIG` mode.
* `find_package(Libxc)` - find any xc libraries and headers
* `find_package(Libxc 3.0.0 EXACT CONFIG REQUIRED COMPONENTS static)` - find Libxc exactly version 3.0.0 built with static libraries or die trying
See [cmake/LibxcConfig.cmake.in](cmake/LibxcConfig.cmake.in) for details of how to detect the Config file and what CMake variables and targets are exported to your project.
#### Use with CMake
After `find_package(Libxc ...)`,
* test if package found with `if(${Libxc_FOUND})` or `if(TARGET Libxc::xc)`
* link to library (establishes dependency), including header and definitions configuration with `target_link_libraries(mytarget Libxc::xc)`
* include header files using `target_include_directories(mytarget PRIVATE $<TARGET_PROPERTY:Libxc::xc,INTERFACE_INCLUDE_DIRECTORIES>)`
* compile target applying `-DUSING_Libxc` definition using `target_compile_definitions(mytarget PRIVATE $<TARGET_PROPERTY:Libxc::xc,INTERFACE_COMPILE_DEFINITIONS>)`
### GPU support with CUDA
Libxc has experimental support for GPU execution using Cuda.
It is enabled with the `--enable-cuda` configure option (CMake is not supported).
To compile libxc you have to pass the `nvcc -x cu` as compiler and `nvcc` (without `-x cu`) as the linker.
This is an example of configuring libxc with cuda support (note that you have to adjust the location of `nvcc` and your GPUs architecture):
```bash
export CC="/usr/local/cuda/bin/nvcc -x cu"
export CFLAGS="-arch=sm_70 -g -O3 --std=c++14 --compiler-options -g,-Wall,-Wfatal-errors,-Wno-unused-variable,-Wno-unused-but-set-variable"
export CCLD="/usr/local/cuda/bin/nvcc"
./configure --enable-cuda
```
When running with libxc compiled with Cuda, both the input and output arrays must always be allocated on the GPU (or using unified memory).
Libxc will fail (most likely you will get a segmentation fault) if a CPU array is passed.
### Python Library
Optional Python bindings are available through the cytpes module. To install
into Python site-packages plese run:
`python setup.py install`
or, to install locally for development:
`python setup.py develop`
The Python bindings require the CMake compilation pathway and the Python
Numerical Python library. A short usage example is provided below:
```python
# Import pylibxc and numpy
>>> import pylibxc
>>> import numpy as np
# Build functional
>>> func = pylibxc.LibXCFunctional("gga_c_pbe", "unpolarized")
# Create input
>>> inp = {}
>>> inp["rho"] = np.random.random((3))
>>> inp["sigma"] = np.random.random((3))
# Compute
>>> ret = func.compute(inp)
>>> for k, v in ret.items():
>>> print(k, v)
zk [[-0.02150768]
[-0.02897835]
[-0.07031054]]
vrho [[-0.06756716]
[-0.07525754]
[-0.08021595]]
vsigma [[0.00547993]
[0.01114585]
[0.00425432]]
```
## FILE ORGANIZATION
The distribution is organized as follows
| | |
| --- | --- |
| ./cmake | CMake helper files |
| ./build | pkgconfig and Fedora spec files |
| ./m4 | m4 scripts used by configure.ac, and libxc.m4 used by other projects linking to libxc |
| ./maple |the Maple source code for the functionals |
| ./scripts | various scripts for libxc development |
| ./src | source files |
| ./testsuite | regression tests |
The most important contents of the src directory for users are
| | |
| ------------------- | ---------------------------------------------- |
| xc.h | main header file with all external definitions |
| xc_funcs.h | automatically generated file with the list of functionals |
In addition, developers will be interested in the following
| | |
| ------------------- | ---------------------------------------------- |
| util.h | header file with internal definitions |
| \*.f90 \*.F90 xc_f.c string_f.h | Fortran 90 interface |
| \*.f03 \*.F03 | Fortran 2003 interface |
| funcs_*.c | automatically generated files with the functional definitions |
| functionals.c | generic interface to simplify access to the different families |
| lda.c gga.c mgga.c | interface to the different families of functionals |
| special_functions.c | implementation of a series of special functions |
| hyb_gga_*.c | definition of the different hybrid GGA functionals |
| hyb_mgga_*.c | definition of the different hybrid meta-GGA functionals |
| lda_*.c | definition of the different LDA functionals |
| gga_*.c | definition of the different GGA functionals |
| mgga_*.c | definition of the different meta-GGA functionals |
| work_lda.c | code that simplifies the implementation of LDAs |
| work_gga_x.c | code that simplifies the implementation of exchange GGAs |
| work_gga_c.c | code that simplifies the implementation of some correlation GGAs |
| work_mgga_x.c | code that simplifies the implementation of exchange meta-GGAs |
| work_mgga_c.c | code that simplifies the implementation of some correlation meta-GGAs |
Notes:
* Most functionals use the framework contained in a work\_\*.c file. This simplifies tremendously the implementation of the different functionals. The work\_\*.c are #include'd in the functional implementations through a preprocessor directive.
* Some files contain more than one functional, as similar functionals are usually grouped together. Therefore, the best way to find where a functional is implemented is by looking at its keyword in xc_funcs.h and using grep to find the correct file.
* The files where the functionals are defined are named as family_type_name.c, where:
family - functional family (lda, gga, hyb_gga, or mgga)
type - type of functional (x, c, xc, or k)
name - name of the functional or class of functionals
|
