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/*
Copyright (c) 2011-2012 Sascha Kastens <sascha.kastens@studium.uni-hamburg.de>
Copyright (c) 2011-2012 Center for Bioinformatics, University of Hamburg
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
*/
#ifndef LTRSIFT_H
#define LTRSIFT_H
#include <gtk/gtk.h>
#include <glib.h>
#include <glib/gstdio.h>
#include <gdk/gdkkeysyms.h>
#include <string.h>
#include "genometools.h"
#include "gtk_blastn_params.h"
#include "gtk_blastn_params_refseq.h"
#include "gtk_label_close.h"
#include "gtk_ltr_assistant.h"
#include "gtk_ltr_families.h"
#include "gtk_ltr_filter.h"
#include "gtk_project_settings.h"
#include "preprocess_stream.h"
#include "script_filter_stream.h"
typedef struct _GUIData GUIData;
struct _GUIData
{
GtkWidget *menubar;
GtkWidget *menubar_save;
GtkWidget *menubar_save_as;
GtkWidget *menubar_export;
GtkWidget *menubar_close;
GtkWidget *menubar_project;
GtkWidget *menubar_view_columns;
GtkWidget *vbox;
GtkWidget *ltrfams;
GtkWidget *ltrfilt;
GtkWidget *projset;
GtkWidget *progressbar;
GtkWidget *statusbar;
GtkWidget *main_window;
GtkWidget *assistant;
guint statusbar_context_id;
gchar *style_file;
GtError *err;
GtHashmap *refseq_paramsets;
};
gint apply_gui_settings(GUIData *ltrgui);
gint save_gui_settings(GUIData *ltrgui);
#endif
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