1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
|
#!/usr/bin/make -f
# DH_VERBOSE := 1
export LC_ALL=C.UTF-8
include /usr/share/dpkg/default.mk
export DEB_BUILD_MAINT_OPTIONS=hardening=+all
%:
dh $@ --with python3
### When overriding auto_test make sure DEB_BUILD_OPTIONS will be respected
#override_dh_auto_test:
#ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS)))
# do_stuff_for_testing
#endif
override_dh_install:
cat debian/missing-sources/pe.pos_sorted.sam |samtools view -Sb - > data/pe.pos_sorted.bam
cat debian/missing-sources/sr.pos_sorted.sam |samtools view -Sb - > data/sr.pos_sorted.bam
dh_install
rm -f debian/$(DEB_SOURCE)*/usr/share/$(DEB_SOURCE)/scripts/lumpyexpress.config
override_dh_python3:
dh_python3 --shebang=/usr/bin/python3
|
