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/* -------------------------------------------------------------------------- *
* MMB (MacroMoleculeBuilder) *
* -------------------------------------------------------------------------- *
* *
* Copyright (c) 2011-12 by the Author. *
* Author: Samuel Flores *
* *
* See RNABuilder.cpp for the copyright and usage agreement. *
* -------------------------------------------------------------------------- */
#ifndef DisplacementContainer_H_
#define DisplacementContainer_H_
#include "BiopolymerClass.h"
#include "Utils.h"
class DisplacementContainer {
private:
vector <Displacement> displacementVector;
public:
void clear() {displacementVector.clear();};
DisplacementContainer() {clear(); };
void validateDisplacement(const Displacement displacement , BiopolymerClassContainer & myBiopolymerContainer);
void initializeDisplacement(Displacement & displacement) {displacement.chain = ""; displacement.displacement = Vec3(0);};
void add(Displacement displacement,BiopolymerClassContainer & myBiopolymerContainer ){validateDisplacement(displacement,myBiopolymerContainer); displacementVector.push_back(displacement); };
Displacement & updDisplacement(int displacementIndex) {return displacementVector[displacementIndex]; };
Displacement & updDisplacement(String chain) ;
int numDisplacements() {return displacementVector.size(); };
bool hasChain(String chain);
Vec3 getInitialDisplacementVec3(String chain) ;
vector <Displacement> getDisplacementVector( ){return displacementVector; };
};
#endif
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