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#!/usr/bin/make -f
export PYBUILD_NAME=MACS2
export DEB_BUILD_MAINT_OPTIONS=hardening=+all
include /usr/share/dpkg/default.mk
subcommands=callpeak bdgpeakcall bdgbroadcall bdgcmp bdgopt cmbreps bdgdiff \
filterdup predictd pileup randsample refinepeak
tagline=\- Model\-based Analysis for ChIP\-Sequencing
# DH_VERBOSE := 1
%:
dh $@ --with python2 --buildsystem=pybuild
override_dh_auto_build:
for pyx in `find MACS2/ -name "*.pyx" | grep -v khash`; do \
rm -f $${pyx%%.pyx}.{h,c}; touch $${pyx}; done
cp setup.py setup.py.orig
cp setup_w_cython.py setup.py
dh_auto_build
PYTHONPATH=./.pybuild/pythonX.Y_2.7/build/ help2man \
--no-discard-stderr --no-info \
--name "macs2 ${tagline}" "python bin/macs2" > debian/macs2.1
for subcommand in ${subcommands}; do printf \
"[NAME]\nmacs2_$${subcommand} ${tagline}\n" \
> debian/macs2_$${subcommand}-man-include; done
for subcommand in ${subcommands}; do \
PYTHONPATH=./.pybuild/pythonX.Y_2.7/build/ help2man \
--no-discard-stderr --no-info --version-string="$(DEB_VERSION_UPSTREAM)" \
--include debian/macs2_$${subcommand}-man-include \
"python bin/macs2 $${subcommand}" > \
debian/macs2_$${subcommand}.1; done
override_dh_auto_clean:
dh_auto_clean
rm -f debian/*.1 debian/*-man-include
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