File: model_conf.xml

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<?xml version='1.0' encoding='UTF-8'?>
<!--
Authors: Jim Doe, John Doe
Copyright: 2022 Pasteur
See COPYRIGHT file for details.

init_pack is a package of models for macsyfinder
(https://github.com/gem-pasteur/macsyfinder)
init_pack description in one line of this package

This work is licensed under the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.
To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/
or send a letter to Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.
-->
<model_config>
  <weights>
    <mandatory>1.0</mandatory>
    <accessory>0.5</accessory>
    <exchangeable>0.8</exchangeable>
    <redundancy_penalty>1.5</redundancy_penalty>
    <out_of_cluster>0.7</out_of_cluster>
  </weights>
  <filtering>
    <e_value_search>0.1</e_value_search>
    <i_evalue_sel>0.001</i_evalue_sel>
    <coverage_profile>0.5</coverage_profile>
    <cut_ga>True</cut_ga>
  </filtering>
</model_config>