1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29
|
<?xml version='1.0' encoding='UTF-8'?>
<!--
Authors: Jim Doe, John Doe
Copyright: 2022 Pasteur
See COPYRIGHT file for details.
init_pack is a package of models for macsyfinder
(https://github.com/gem-pasteur/macsyfinder)
init_pack description in one line of this package
This work is licensed under the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License.
To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-sa/4.0/
or send a letter to Creative Commons, PO Box 1866, Mountain View, CA 94042, USA.
-->
<model_config>
<weights>
<mandatory>1.0</mandatory>
<accessory>0.5</accessory>
<exchangeable>0.8</exchangeable>
<redundancy_penalty>1.5</redundancy_penalty>
<out_of_cluster>0.7</out_of_cluster>
</weights>
<filtering>
<e_value_search>0.1</e_value_search>
<i_evalue_sel>0.001</i_evalue_sel>
<coverage_profile>0.5</coverage_profile>
<cut_ga>True</cut_ga>
</filtering>
</model_config>
|