1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
|
name: testing
on:
push:
branches: [ main ]
pull_request:
branches: [ main ]
jobs:
build:
runs-on: ubuntu-latest
strategy:
matrix:
python-version: ["3.10", "3.13"]
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
- name: Upgrade pip
run: python -m pip install --upgrade pip
- name: Install HMMER
run: sudo apt-get -y install hmmer
- name: Install MacSyLib
run: python -m pip install .[dev]
- name: Test and Compute the code coverage
run: coverage run
- name: Upload Coverage to Codecov
uses: codecov/codecov-action@v3
if: matrix.python-version == '3.13'
|
