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#########################################################################
# MacSyLib - Python library to detect macromolecular systems #
# in prokaryotes protein dataset using systems modelling #
# and similarity search. #
# #
# Authors: Sophie Abby, Bertrand Neron #
# Copyright (c) 2014-2025 Institut Pasteur (Paris) and CNRS. #
# See the COPYRIGHT file for details #
# #
# This file is part of MacSyLib package. #
# #
# MacSyLib is free software: you can redistribute it and/or modify #
# it under the terms of the GNU General Public License as published by #
# the Free Software Foundation, either version 3 of the License, or #
# (at your option) any later version. #
# #
# MacSyLib is distributed in the hope that it will be useful, #
# but WITHOUT ANY WARRANTY; without even the implied warranty of #
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the #
# GNU General Public License for more details . #
# #
# You should have received a copy of the GNU General Public License #
# along with MacSyLib (COPYING). #
# If not, see <https://www.gnu.org/licenses/>. #
#########################################################################
import subprocess
from tests import MacsyTest
class Test_msl_data(MacsyTest):
def test_help(self):
expected_output = r"""usage: msl_data [-h] [-v] [--version]
{available,download,install,uninstall,search,info,list,freeze,cite,help,check,show,definition,init}"""
p = subprocess.run("msl_data --help", shell=True, check=True, capture_output=True, text=True, encoding='utf8')
self.assertEqual(p.returncode, 0)
# The output is not exactly formated in same manner according to the width of the terminal where the test is executed
# on some execution some lines ar wrapped
# on some other no
# so I test only the beginning of the help message
self.assertTrue(p.stdout.startswith(expected_output))
class Test_msl_profile(MacsyTest):
def test_help(self):
p = subprocess.run("msl_profile --help", shell=True, check=True, capture_output=True, text=True, encoding='utf8')
self.assertEqual(p.returncode, 0)
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