1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
|
Source: mapdamage
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>,
Étienne Mollier <emollier@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-sequence-python3,
python3-all-dev:native,
libpython3-all-dev,
pybuild-plugin-pyproject,
python3-setuptools,
python3-pysam <!nocheck>,
seqtk <!nocheck>,
r-base-core <!nocheck>,
r-cran-gam <!nocheck>,
r-cran-ggplot2 <!nocheck>,
r-cran-inline <!nocheck>
Standards-Version: 4.7.2
Vcs-Browser: https://salsa.debian.org/med-team/mapdamage
Vcs-Git: https://salsa.debian.org/med-team/mapdamage.git
Homepage: https://ginolhac.github.io/mapDamage/
Package: mapdamage
Architecture: any
Depends: ${python3:Depends},
${shlibs:Depends},
${misc:Depends},
r-base-core,
r-cran-gam,
r-cran-ggplot2,
r-cran-inline,
seqtk,
python3-pysam,
r-cran-rcpp,
r-cran-rcppgsl,
libopenblas-dev | libblas-dev | libatlas-base-dev | libblas.so,
libopenblas-dev | liblapack-dev | libatlas-base-dev | liblapack.so
Description: tracking and quantifying damage patterns in ancient DNA sequences
MapDamage is a computational framework written in Python and R, which
tracks and quantifies DNA damage patterns among ancient DNA sequencing
reads generated by Next-Generation Sequencing platforms.
.
MapDamage is developed at the Centre for GeoGenetics by the
Orlando Group.
|
