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#!/usr/bin/make -f
# Uncomment this to turn on verbose mode.
#export DH_VERBOSE=1
export DEB_BUILD_MAINT_OPTIONS = hardening=+all
DEB_HOST_MULTIARCH ?= $(shell dpkg-architecture -qDEB_HOST_MULTIARCH)
SRC_VERSION =$(shell dpkg-parsechangelog | sed -ne 's/^Version: \(\([0-9]\+\):\)\?\(.*\)-.*/\3/p')
ifneq ($(wildcard /usr/include/hdf5/serial),)
export DEB_CPPFLAGS_MAINT_APPEND := -I/usr/include/hdf5/serial
export DEB_LDFLAGS_MAINT_APPEND := -Wl,-L/usr/lib/$(DEB_HOST_MULTIARCH)/hdf5/serial
endif
CPPFLAGS:=$(shell dpkg-buildflags --get CPPFLAGS)
CFLAGS:=$(shell dpkg-buildflags --get CFLAGS) $(CPPFLAGS)
CXXFLAGS:=$(shell dpkg-buildflags --get CXXFLAGS) $(CPPFLAGS)
LDFLAGS:=$(shell dpkg-buildflags --get LDFLAGS)
%:
dh $@
get-orig-source:
uscan --verbose --force-download
override_dh_auto_build:
mkdir mapsembler2_extremities/build
cd mapsembler2_extremities/build && cmake .. && make
cd mapsembler2_extend && make k=29
cd kissreads_graph && make k=29
cd kissreads && make k=29
override_dh_clean:
rm -rf mapsembler2_extremities/build
cd mapsembler2_extend && make clean
rm -f mapsembler2_extend/mapsembler_extend
cd kissreads_graph && make clean
rm -f kissreads_graph/mapsembler2_kissreads_graph
cd kissreads && make clean
rm -f kissreads/mapsembler2_kissreads
rm -f mapsembler2_extremities.1
rm -f mapsembler_extend.1
rm -f kissreads.1
rm -f kissreads_graph.1
dh_clean
override_dh_install:
help2man --help-option=-h --no-discard-stderr --version-string=$(SRC_VERSION) ./mapsembler2_extremities/build/mapsembler2_extremities > mapsembler2_extremities.1
help2man --help-option=-h --no-discard-stderr --version-string=$(SRC_VERSION) ./mapsembler2_extend/mapsembler_extend > mapsembler_extend.1
mv ./kissreads/kissreads ./kissreads/mapsembler2_kissreads
help2man --help-option=-h --no-discard-stderr --version-string=$(SRC_VERSION) ./kissreads/mapsembler2_kissreads > mapsembler2_kissreads.1
mv ./kissreads_graph/kissreads_graph ./kissreads_graph/mapsembler2_kissreads_graph
help2man --help-option=-h --no-discard-stderr --version-string=$(SRC_VERSION) ./kissreads_graph/mapsembler2_kissreads_graph > mapsembler2_kissreads_graph.1
cp run_mapsembler2_pipeline.sh run_mapsembler2_pipeline
help2man --help-option=-h --no-discard-stderr --version-string=$(SRC_VERSION) ./run_mapsembler2_pipeline > run_mapsembler2_pipeline.1
dh_install
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