File: sequenceEditorGraphicsView.hpp

package info (click to toggle)
massxpert 2.3.6-1squeeze1
  • links: PTS, VCS
  • area: main
  • in suites: squeeze
  • size: 20,736 kB
  • ctags: 3,541
  • sloc: cpp: 44,108; xml: 7,381; sh: 604; makefile: 108; ansic: 7
file content (285 lines) | stat: -rw-r--r-- 8,836 bytes parent folder | download | duplicates (4)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
/* massXpert - the true massist's program.
   --------------------------------------
   Copyright(C) 2006,2007 Filippo Rusconi

   http://www.massxpert.org/massXpert

   This file is part of the massXpert project.

   The massxpert project is the successor to the "GNU polyxmass"
   project that is an official GNU project package(see
   www.gnu.org). The massXpert project is not endorsed by the GNU
   project, although it is released ---in its entirety--- under the
   GNU General Public License. A huge part of the code in massXpert
   is actually a C++ rewrite of code in GNU polyxmass. As such
   massXpert was started at the Centre National de la Recherche
   Scientifique(FRANCE), that granted me the formal authorization to
   publish it under this Free Software License.

   This software is free software; you can redistribute it and/or
   modify it under the terms of the GNU  General Public
   License version 3, as published by the Free Software Foundation.
   

   This software is distributed in the hope that it will be useful,
   but WITHOUT ANY WARRANTY; without even the implied warranty of
   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
   General Public License for more details.

   You should have received a copy of the GNU General Public License
   along with this software; if not, write to the

   Free Software Foundation, Inc.,

   51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA.
*/


#ifndef SEQUENCE_EDITOR_GRAPHICS_VIEW_HPP
#define SEQUENCE_EDITOR_GRAPHICS_VIEW_HPP


/////////////////////// Qt includes
#include <QGraphicsView>
#include <QLineEdit>


/////////////////////// Local includes
#include "polymer.hpp"
#include "chemEntVignette.hpp"
#include "sequenceSelection.hpp"

namespace massXpert
{

  enum MxtCursorLinePosition
    {
      MXT_START_OF_LINE,
      MXT_END_OF_LINE
    };

  enum MxtCardinalDirection
    {
      MXT_CENTER,
      MXT_NORTH,
      MXT_NORTH_EAST,
      MXT_EAST,
      MXT_SOUTH_EAST,
      MXT_SOUTH,
      MXT_SOUTH_WEST,
      MXT_WEST,
      MXT_NORTH_WEST
    };


  class SequenceEditorWnd;
  class MonomerCodeEvaluator;
  class Coordinates;
  

  class SequenceEditorGraphicsView : public QGraphicsView
  {
    Q_OBJECT

    private:
    // Unallocated, this pointer points to the m_polymer member of the
    // parent instance into which this graphics view packed. Usually
    // that is the SequenceEditorWnd sequence editor window were
    // this view is the m_editorView member.
    QPointer<Polymer> mp_polymer;
    SequenceEditorWnd *mp_editorWnd;
    MonomerCodeEvaluator *mpa_monomerCodeEvaluator;
  
    bool m_sequenceDrawn;
  
    int m_columns;
    int m_rows;
  
    int m_lastClickedVignette;
    
    SequenceSelection *mpa_selection;
    
    bool m_mouseDragging;
    bool m_ongoingMouseMultiSelection;
    bool m_ongoingKeyboardMultiSelection;
      
    QPointF m_selectionFirstPoint;
    QPointF m_selectionSecondPoint;
  
    int m_selectionFirstIndex;
    int m_selectionSecondIndex;
  
    double m_xScaleFactor;
    double m_yScaleFactor;

    int m_leftMargin;
  
    int m_requestedVignetteSize; // the width in fact.

    QSvgRenderer *mpa_cursorRenderer;
    QGraphicsSvgItem *mpa_cursorVignette;
  
    // This list will hold pointers to allocated
    // ChemEntVignette items, but we do not possess
    // these. The possessor of these items is the scene that is a member
    // of the sequence editor window. We have this list that somehow
    // duplicates the internal scene list(that is returned by the
    // items() call) because we needed to be able to access the graphics
    // items in the polar order of the polymer sequence(the items()
    // call returns an un-ordered list of items).
    QList<ChemEntVignette *> m_monomerVignetteList;

    // This list will hold pointers to allocated QGraphicsTextItem
    // items, but we do not possess these. The possessor of these items
    // is the scene that is a member of the sequence editor window. We
    // have this list that somehow duplicates the internal scene list
    //(that is returned by the items() call) because we needed to be
    // able to access the text items apart from all the other
    // items. Indeed, these items are the text labels that are displayed
    // in the left margin area to indicate the position of the monomer
    // in the polymer sequence at each beginning of scene line.
    QList<QGraphicsTextItem *> m_labelList;

    void focusOutEvent(QFocusEvent *);

   
  protected:
    void paintEvent(QPaintEvent *);
    void resizeEvent(QResizeEvent *);

    void mouseMoveEvent(QMouseEvent *);
    void mousePressEvent(QMouseEvent *);
    void mouseReleaseEvent(QMouseEvent *);

    void keyPressEvent(QKeyEvent *);
    void keyReleaseEvent(QKeyEvent *);
    
    // KEYBOARD HANDLERS ///////////////////////////////////////////////////
    void MoveToPreviousChar(QKeyEvent *);
    void MoveToNextChar(QKeyEvent *);
    void MoveToPreviousLine(QKeyEvent *);
    void MoveToNextLine(QKeyEvent *);
    void MoveToPreviousPage(QKeyEvent *);
    void MoveToNextPage(QKeyEvent *);
    void MoveToStartOfLine(QKeyEvent *);
    void MoveToEndOfLine(QKeyEvent *);
    void MoveToStartOfDocument(QKeyEvent *);
    void MoveToEndOfDocument(QKeyEvent *);
    void SelectNextChar(QKeyEvent *);
    void SelectPreviousChar(QKeyEvent *);
    void SelectNextLine(QKeyEvent *);
    void SelectPreviousLine(QKeyEvent *);
    void SelectNextPage(QKeyEvent *);
    void SelectPreviousPage(QKeyEvent *);
    void SelectStartOfLine(QKeyEvent *);
    void SelectEndOfLine(QKeyEvent *);
    void SelectStartOfDocument(QKeyEvent *);
    void SelectEndOfDocument(QKeyEvent *);
    void SelectAll(QKeyEvent *);

    void keyPressEventKeyEscape(QKeyEvent *);
    void keyPressEventKeyReturn(QKeyEvent *);
    void keyPressEventKeyBackspace(QKeyEvent *);
    void keyPressEventKeyDelete(QKeyEvent *);
    void keyPressEventAlpha(QKeyEvent *);


  public:
    SequenceEditorGraphicsView(SequenceEditorWnd * = 0);
    ~SequenceEditorGraphicsView();

    bool m_kbdShiftDown;
    bool m_kbdCtrlDown;
    bool m_kbdAltDown;

    int requestedVignetteSize();
    int leftMargin();
    int columns();
    int rows();
        
    int lastClickedVignette();

    void setPolymer(Polymer *);
    const Polymer *polymer() const;
    
    void setEditorWnd(SequenceEditorWnd *);

    void setMonomerCodeEvaluator(MonomerCodeEvaluator *evaluator);
  
    void updateColumns();
    void updateMonomerPosition(int);
    void updateVScrollBar();
    void updateSceneRect();

    int vignetteIndex(const QPointF &);
    QPointF vignetteLocation(int, MxtCardinalDirection = MXT_NORTH_WEST);

    void setSelection(const Coordinates &coordinates, 
		       bool, bool);
    void setSelection(const CoordinateList &, 
		       bool, bool);
    void setSelection(int start, int end, bool, bool);

    void resetSelection();
    void resetSelectionButLastRegion();
    void resetMultiSelectionRegionsButFirstSelection();
    
    bool selectionIndices(CoordinateList * = 0);
    
    void setOngoingMouseMultiSelection(bool);
    
    // SCENE-DRAWING FUNCTIONS /////////////////////////////////////////////
    bool renderCursor();

    bool scaleCursor();

    bool positionCursor(MxtCursorLinePosition = MXT_START_OF_LINE);
    bool positionCursor(const QPointF &, 
			 MxtCursorLinePosition = MXT_START_OF_LINE);
    bool positionCursor(double, double, 
			 MxtCursorLinePosition = MXT_START_OF_LINE);
    bool positionCursor(int, MxtCursorLinePosition = MXT_START_OF_LINE);
    bool positionCursor(const RegionSelection &, 
			 MxtCursorLinePosition = MXT_START_OF_LINE);

    ChemEntVignette *renderVignette(const Monomer &);

    bool modifyVignetteAt(int, Modif *);
    bool unmodifyVignetteAt(int, Modif *);

    bool crossLinkVignetteAt(int, CrossLinker *);
    bool uncrossLinkVignetteAt(int, CrossLinker *);

    bool removeVignetteAt(int);
    bool renderVignettes();
    bool scaleVignette(ChemEntVignette *);
    bool scaleVignettes();
    bool positionVignette(ChemEntVignette *, int);
    bool positionVignettes();
    
    int drawSequence(bool = false);
    bool updateSequence();
  
    // POLYMER SEQUENCE-MODIFYING FUNCTIONS ///////////////////////////////
    int insertMonomerAt(const Monomer *, int, bool = false);
    int insertMonomerAtPoint(const Monomer *, bool = false);
    int insertSequenceAtPoint(Sequence &);

    int removeMonomerAt(int, bool = false);
    bool prepareMonomerRemovalAt(int);
  
    int removeSelectedOligomer();
    int removeSequenceRegion(int, int);
  


  public slots:
    ////////////////////////////// SLOTS ///////////////////////////////
    void vScrollBarActionTriggered(int);
    bool requestVignetteSize(int);
  };

} // namespace massXpert


#endif // SEQUENCE_EDITOR_GRAPHICS_VIEW_HPP