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<project name="Mauve" default="compile">
<description>
This buildfile tells the ant build tool how to build and package the Mauve Java
visualization environment.
</description>
<!-- set the release version, unless making a snapshot -->
<target name="release_properties" unless="env.MAUVE_SNAPSHOT">
<property name="release.version" value="2.4.0"/>
</target>
<!-- deployment locations for production ASAP integration -->
<property name="deploy.asapdir" value="/srv/asap/htdocs/mauve" />
<property name="asap.codebase" value="http://asap.ahabs.wisc.edu/asap/mauve/" />
<!-- deployment locations for devel ASAP integration -->
<!--
<property name="deploy.asapdir" value="/srv/asap-devel/htdocs/mauve" />
<property name="asap.codebase" value="http://asap.ahabs.wisc.edu/asap-devel/mauve/" />
-->
<!-- deployment locations for standalone releases -->
<property name="deploy.address" value="darlini8@darlinglab.org" />
<property name="deploy.username" value="darlini8" />
<property name="deploy.win32.keyfile" value="C:\Documents and Settings\koadman\plonk.ppk" />
<property name="deploy.serverdir" value="/home3/darlini8/www/mauve/downloads" />
<property name="key.alias" value="mauve" />
<property name="key.keystore" value="C:\Documents and Settings\koadman\My Documents\mauve-keystore" />
<!-- set global properties for this build -->
<property name="src" location="src"/>
<property name="build" location="bin"/>
<property name="dist" location="dist"/>
<property name="deblib" location="/usr/share/java" />
<property name="support" location="/usr/share/java"/>
<!-- Make datestamp for update checks -->
<tstamp>
<format property="datestamp" pattern="yyyyMMdd" />
</tstamp>
<!-- increment the build number-->
<buildnumber/>
<!-- get any environment variables -->
<property environment="env" />
<taskdef resource="net/sf/antcontrib/antcontrib.properties">
<classpath>
<pathelement path="${support}/ant-contrib.jar"/>
</classpath>
</taskdef>
<target name="init">
<!-- Create the time stamp -->
<tstamp/>
</target>
<!-- set the timestamp if building a snapshot -->
<target name="snapshot_properties" if="env.MAUVE_SNAPSHOT">
<property name="release.version" value="${datestamp}"/>
</target>
<!-- set the version number -->
<target name="create_properties" depends="snapshot_properties,release_properties">
<propertyfile
file="${src}/version.properties"
comment="Stores version and build information">
<entry key="release.version" value="${release.version}"/>
<entry key="build.number" value="${build.number}"/>
<entry key="build.timestamp" value="${datestamp}"/>
</propertyfile>
</target>
<target name="compile" depends="init,create_properties" description="compile the java source">
<!-- Create the build directory structure used by compile -->
<mkdir dir="${build}" />
<!-- Build all java source files -->
<javac
classpath="
${deblib}/biojava.jar;
${deblib}/commons-cli.jar;
${support}/junit.jar;
${deblib}/zeus-jscl.jar;
${deblib}/ant.jar;
${deblib}/dbus.jar;
${deblib}/unix.jar"
srcdir="${src}"
destdir="${build}"
target="1.6"
source="1.6"
>
<compilerarg value="-Xbootclasspath/p:${env.JAVA_6_RT_PATH}"/>
</javac>
<mkdir dir="${build}/images"/>
<copy todir="${build}/images">
<fileset dir="${src}/images"/>
</copy>
<copy file="${src}/version.properties" todir="${build}"/>
</target>
<target name="rmic" depends="compile">
<rmic base="${build}" classname="org.gel.mauve.remote.RemoteControlImpl" />
</target>
<target name="jar" depends="rmic">
<!-- Put everything in ${build} into the Mauve.jar file -->
<delete file="Mauve.jar"/>
<jar jarfile="Mauve.jar">
<fileset dir="${build}" includes="**/*" />
<!-- Create a manifest file to tell java the name of the main class -->
<manifest>
<attribute name="Main-Class" value="org.gel.mauve.gui.Mauve"/>
<attribute name="Built-By" value="${user.name}"/>
<section name="common">
<attribute name="Specification-Title" value="Mauve"/>
<attribute name="Specification-Version" value="${version}"/>
<attribute name="Specification-Vendor" value="Aaron E. Darling"/>
<attribute name="Implementation-Title" value="Mauve"/>
<attribute name="Implementation-Version" value="${version} ${TODAY}"/>
<attribute name="Implementation-Vendor" value="Aaron E. Darling"/>
</section>
</manifest>
</jar>
</target>
<target name="appletjar" depends="rmic">
<delete file="mauveApplet.jar" />
<jar jarfile="mauveApplet.jar">
<fileset dir="${build}">
<include name="org/gel/mauve/remote/*" />
</fileset>
</jar>
</target>
<target name="checkkeyprops" unless="key.password">
<fail message="key.password must be set on command line, using -Dkey.password=<password>" />
</target>
<target name="signjars" depends="checkkeyprops,jar,appletjar">
<signjar jar="Mauve.jar" alias="${key.alias}" storepass="${key.password}" keystore="${key.keystore}" />
<signjar jar="mauveApplet.jar" alias="${key.alias}" storepass="${key.password}" keystore="${key.keystore}" />
</target>
<target name="testdist" depends="signjars">
<copy todir="C:\htdocs" file="Mauve.jar" />
<copy todir="C:\htdocs" file="mauveApplet.jar" />
<copy todir="C:\htdocs" file="./testdata/smallAlignment.jar" />
<copy todir="C:\htdocs" file="./jws/index.html" />
<copy todir="C:\htdocs" file="./jws/mauve.jnlp" />
</target>
<target name="dist" depends="jar" description="generate the distribution" >
<!-- Create the distribution directory -->
<mkdir dir="${dist}" />
<!-- Set the tarball OS name based on the build host OS -->
<condition property="OSNAME" value="linux">
<os name="Linux"/>
</condition>
<condition property="OSNAME" value="OSX">
<os name="Mac OS X"/>
</condition>
<!-- Make the tarball -->
<tar destfile="${dist}/mauve_${OSNAME}_${release.version}.tar.gz" compression="gzip">
<!-- Copy various support files into the dist directory-->
<tarfileset dir="." prefix="/mauve_${release.version}">
<include name="Mauve.jar" />
<include name="COPYING" />
<include name="README" />
<include name="ChangeLog.html" />
</tarfileset>
<tarfileset dir="linux-x64" prefix="/mauve_${release.version}/" mode="755">
<include name="Mauve" />
</tarfileset>
<tarfileset dir="linux-x64" prefix="/mauve_${release.version}/linux-x64" mode="755">
<include name="mauveAligner" />
<include name="progressiveMauve" />
</tarfileset>
</tar>
</target>
<target name="srcdist" depends="init" description="package a source distribution">
<tar destfile="${dist}/mauve_source_${datestamp}.tar.gz" compression="gzip">
<!-- Copy support files into the dist directory-->
<tarfileset dir="." prefix="/mauve-src">
<include name="COPYING" />
<include name="Mauve" />
<include name="README" />
<include name="TODO" />
<include name="ChangeLog.html" />
<include name="build.xml" />
<include name="mauve.nsi" />
<include name="mauve.dox" />
<include name="mauve.ico" />
<include name=".project" />
<include name=".classpath" />
<include name="mauve.icns" />
<include name="Mauve Online Documentation.url" />
<include name="Mauve.lnk" />
</tarfileset>
<tarfileset dir="${src}" includes="**/*" prefix="/mauve-src/src" />
</tar>
</target>
<target name="run" depends="jar" description="run Mauve">
<java jar="Mauve.jar" fork="true" />
</target>
<target name="asapResources">
<pathconvert property="asap.resources" pathsep=" ">
<mapper>
<chainedmapper>
<mapper type="flatten" />
<mapper type="glob" from="*" to="<jar href="*" /> "/>
</chainedmapper>
</mapper>
</pathconvert>
</target>
<target name="deployASAP" depends="signjars, asapResources">
<echo message="Deploying mauve ASAP stuff to directory ${asap.dir}" />
<echo message="Using codebase of ${asap.codebase}" />
<!-- update and copy mauve.jnlp to dist-->
<copy file="./jws/mauve.jnlp.template" tofile="${dist}/mauve.jnlp" overwrite="yes">
<filterset>
<filter token="CODEBASE" value="${asap.codebase}"/>
<filter token="RESOURCES" value="${asap.resources}"/>
<filter token="ARGUMENTS" value=""/>
</filterset>
</copy>
</target>
<!-- assumes that passwordless ssh authentication has been configured to the web server -->
<target name="deployLinux" depends="dist">
<exec executable="scp">
<arg value="${dist}/mauve_linux_${release.version}.tar.gz" />
<arg value="${deploy.address}:${deploy.serverdir}" />
</exec>
<echo file="${dist}/latest.linux" message="${datestamp}"/>
<exec executable="scp">
<arg value="${dist}/latest.linux" />
<arg value="${deploy.address}:${deploy.serverdir}" />
</exec>
</target>
</project>
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