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/*******************************************************************************
*
* McStas, neutron ray-tracing package
* Copyright (C) 1997-2006, All rights reserved
* Risoe National Laboratory, Roskilde, Denmark
* Institut Laue Langevin, Grenoble, France
*
* Component: Virtual_tripoli4_input.comp
* %I
* Written by: <a href="mailto:guillaume.campioni@cea.fr">Guillaume Campioni</a>
* Date: Sep 28th, 2001
* Origin: <a href="http://www.serma.cea.fr/">SERMA</a>
* Modified by: E. Farhi: Added automatic orientation+beam info+intensity norm
*
* This component reads a file of recorded neutrons from the reactor Monte Carlo
* code TRIPOLI4.4 as a source of particles.
*
* %D
* This component generates neutron events from a file created using the
* TRIPOLI4 Monte Carlo code for nuclear reactors (as MCNP). It is used to
* calculate flux exiting from hot or cold neutron sources.
* Neutron position and velocity is set from the file. The neutron time is
* left at zero.
* Storage files from TRIPOLI4.4 contain several batches of particules, all
* of them having the same statictical weight.
*
* Note that axes orientation may be different between TRIPOLI4.4 and McStas.
* The component has the ability to center and orient the neutron beam to the Z-axis.
* It also changes the coordinate system from the Tripoli frame to the McStas one.
* The verbose mode is highly recommended as it displays lots of useful informations,
* including the absolute intensity normalisation factor. All neutron fluxes in the
* instrument should be multiplied by this factor. Such a renormalization is done
* when 'autocenter' contains the word 'rescale'.
* The source total intensity is 1.054e18 for LLB/Saclay (14 MW) and 4.28e18 for
* ILL/Grenoble (58 MW).
*
* Format of TRIPOLI4.4 event files is :
*
* NEUTRON energy position_X position_Y position_Z dir_X dir_Y dir_Z weight
*
* energy is in Mega eV
* positions are in cm and the direction vector is normalized to 1.
*
* %BUGS
* We recommend NOT to use parallel execution (MPI) with this component. If you
* need to, set parameter 'smooth=1'.
*
* EXAMPLE:
* To create a 'source' from a Tripoli4 simulation event file for the ILL:
* COMPONENT source = Virtual_tripoli4_input(
* filename = "ILL_SFH.dat", intensity=4.28e18,
* verbose = 1, autocenter="translate rotate rescale")
*
* %P
* INPUT PARAMETERS
* filename: [str] Name of the Tripoli4.4 neutron input file. Empty string "" unactivates component
* repeat_count: [1] Number of times the source must be generated. 0 unactivates the component
* verbose: [0|1] Displays additional informations if set to 1
* intensity: [n/s] Initial total Source integrated intensity
* autocenter: [str] String which may contain following keywords. "translate" or "center" to center the beam area AT (0,0,0) "rotate" or "orient" to center the beam velocity along Z "rescale" to adapt intensity to abs. units. Other words are ignored.
* T4_ANALYSE: [1] Number of neutron events to read for file pre-analysis. Use 0 to analyze them all.
* T4_ANALYSE_EMIN: [meV] Minimal energy to use for file pre-analysis
* T4_ANALYSE_EMAX: [meV] Maximal energy to use for file pre-analysis
* radius: [m] In the case the Tripoli4 batch file is a point, you may specify a disk emission area for the source.
* smooth: [0/1] Smooth sparsed event files for file repetitions.
*
* OUTPUT PARAMETERS
* head: [char] header buffer
* nl: [long] nb of lines in header
* mean_x: [m] source center coordinate
* mean_y: [m] source center coordinate
* mean_z: [m] source center coordinate
* angle2z: [rad] rotation angle required to orient beam along Z axis
* nbatch: [long] number of read neutron batches
*
* %L
* <a href="http://www.nea.fr/html/dbprog/tripoli-abs.html">Tripoli</a>
* %L
* Virtual_tripoli4_output
* %L
* CAMPIONI Guillaume, Etude et Modelisation des Sources Froides de Neutrons, These de Doctorat, CEA Saclay/UJF (2004)
*
* %E
*
*******************************************************************************/
DEFINE COMPONENT Virtual_tripoli4_input
SETTING PARAMETERS (string filename=0, string autocenter=0, repeat_count=1, verbose=0, intensity=1,
T4_ANALYSE=10000, radius=0, T4_ANALYSE_EMIN=0, T4_ANALYSE_EMAX=0,smooth=1)
/* Neutron parameters: (x,y,z,vx,vy,vz,t,sx,sy,sz,p) */
SHARE
%{
#ifndef TRIPOLI4_INPUT_DEFS
#define TRIPOLI4_INPUT_DEFS
/* define Tripoli File parsing functions */
#define T4_WORDSIZE 256
#include <sys/stat.h>
/* functions to identify Tripoli keywords */
int begin_of_batch(const char * word )
{
return strcmp(word,"BEGIN_OF_BATCH")==0?1:0;
}
int end_of_batch(const char * word)
{
return strcmp(word,"END_OF_BATCH")==0?1:0;
}
int is_neutron(const char * word)
{
return strcmp(word,"NEUTRON")==0?1:0;
}
/* tripoli_read_word:
function that reads iteratively words in the file
returns EOF or last character
word[0..l-1]
*/
int tripoli_read_word(FILE *hfile,char *word){
char c;
int i=0;
while((c=fgetc(hfile))!=EOF && isspace(c)){ /* skip spaces */ }
if(c!=EOF){
word[i++]=c;
while((c=fgetc(hfile))!=EOF && i < T4_WORDSIZE) {
if(isspace(c)) break;
word[i++]=c;
}
}
word[i]='\0';
return c;
}
/* tripoli_create_neutron:
function that reads values following the NEUTRON keyword
and assigns neutron parameters.
Warning: Tripoli Coord system (x y z) = (-x z y)
*/
int tripoli_create_neutron(FILE *hfile, double *x,double *y,double *z,
double *vx, double *vy, double *vz,
double *t,
double *sx, double *sy, double *sz,
double *p)
{
double Mev2Joule=1.602e-13;
double speed;
int exit_flag=0, ifield=0;
char word[T4_WORDSIZE];
double field[8];
while(ifield<8){
if(tripoli_read_word(hfile,word)==EOF) { exit_flag=1; break; };
field[ifield++]=strtod(word,NULL);
}
if(field[0] < 0 || exit_flag) { exit_flag=1; }
else {
speed=sqrt(2.* field[0]*Mev2Joule/MNEUTRON);
*x=field[1]/100.0;
*y=field[2]/100.0;
*z=field[3]/100.0;
*vx=field[4]*speed;
*vy=field[5]*speed;
*vz=field[6]*speed;
*p=field[7];
*sx=1.;*sy=*sz=0;
*t=0;
// now change axis system
double tx, ty, tz;
tx=*x; ty=*y; tz=*z; *x=-ty; *y=-tz; *z=tx;
tx=*vx; ty=*vy; tz=*vz; *vx=-ty; *vy=-tz; *vz=tx;
}
return (exit_flag);
}
/* tripoli_get_header:
function that gets header lines until the Tripoli start of a batch
*/
char **tripoli_get_header(FILE *hfile,long *nl){
int i;
char **head, *s;
char word[T4_WORDSIZE];
*nl=0;
s=fgets(word,T4_WORDSIZE,hfile);
while(strncmp(word,"BEGIN_OF_BATCH",14)!=0){
s=fgets(word,T4_WORDSIZE,hfile);
(*nl)++;
}
rewind(hfile);
head=(char **)calloc(*nl,sizeof(char *));
for(i=0;i<*nl;++i){
s=fgets(word,T4_WORDSIZE,hfile);
head[i]=(char *)malloc(T4_WORDSIZE);
strcpy(head[i],word);
}
rewind(hfile);
return head;
}
#endif
%}
DECLARE
%{
int rep; /* Neutron repeat count */
int repeat_cnt; /* Repeat count, MPI taken into account */
FILE *hfile; /* Neutron input file handle */
char **head; /* Tripol4 header*/
long nl; /* Number of lines in header*/
long first_batch; /* position in file of first batch */
long begin_batch, end_batch; /* current batch numbers */
char do_rotate, do_translate;
double mean_x, mean_y, mean_z;
double bx,by,bz;
double angle2z;
long nbatch;
long nsize;
double intensity_extrapolated;
double min_x, min_y, min_z;
double max_x, max_y, max_z;
double min_vx, min_vy, min_vz;
double max_vx, max_vy, max_vz;
double n_count_extrapolated;
%}
INITIALIZE
%{
rep=1;
first_batch=0;
begin_batch=0;
end_batch=0;
do_rotate=0;
do_translate=0;
mean_x=0;
mean_y=0;
mean_z=0;
angle2z=0;
nbatch=0;
nsize=0;
intensity_extrapolated=0;
min_x=FLT_MAX;
min_y=FLT_MAX;
min_z=FLT_MAX;
max_x=-FLT_MAX;
max_y=-FLT_MAX;
max_z=-FLT_MAX;
min_vx=FLT_MAX;
min_vy=FLT_MAX;
min_vz=FLT_MAX;
max_vx=-FLT_MAX;
max_vy=-FLT_MAX;
max_vz=-FLT_MAX;
n_count_extrapolated=0;
char word[T4_WORDSIZE];
char exit_flag=0; /* set to 1 if end of simulation */
int result_read;
double mean_vx=0, mean_vy=0, mean_vz=0, mean_v=0;
double mean_dx=0, mean_dy=0, mean_dz=0;
double n_neutrons=0;
double n_neutrons_p=0;
long filesize =0;
struct stat stfile;
/* Open neutron input file. */
/* (If empty file given, present warning in case of verbose, perform nothing) */
if (!strcmp(filename,"")) {
if (verbose) printf("Tripoli4_input: %s: Empty file given, doing nothing!\n", NAME_CURRENT_COMP);
} else {
printf("non-empty file given\n");
if (filename) {
stat(filename,&stfile);
filesize = stfile.st_size;
hfile = fopen(filename, "r");
}
if(!hfile)
{
fprintf(stderr, "Tripoli4_input: %s: Error: Cannot open input file %s.\n", NAME_CURRENT_COMP, filename);
exit(1);
} else if (verbose)
printf("Tripoli4_input: %s: opening Tripoli4 file '%s'\n", NAME_CURRENT_COMP, filename);
head = tripoli_get_header(hfile, &nl); /* and reset to file start */
while (tripoli_read_word(hfile,word) != EOF) {
/* store position of first batch in file for repeat */
first_batch=ftell(hfile);
if (begin_of_batch(word)) {
if (tripoli_read_word(hfile,word)!=EOF) {
begin_batch=strtol(word,NULL,0);
break;
}
}
if (!strcmp(word,"SIZE") || !strcmp(word,"TAILLE")) {
if (tripoli_read_word(hfile,word)!=EOF) nsize=strtol(word,NULL,0);
}
}
if (verbose) {
printf("Analysing Tripoli4 file %s (", filename);
if (T4_ANALYSE) printf("%g events)\n", T4_ANALYSE);
else printf("all events)\n");
}
/* analyse Tripoli file: count neutrons, get beam center and mean speed
* do that for the first 1e4 neutrons, and extrapolates to file size */
while (!exit_flag && (n_neutrons <= T4_ANALYSE || !T4_ANALYSE)) {
result_read=tripoli_read_word(hfile,word);
if (is_neutron(word)) { /* if key word NEUTRON is found */
double x,y,z,vx,vy,vz,t,p,sx,sy,sz;
if (tripoli_create_neutron(hfile,&x,&y,&z,&vx,&vy,&vz,&t,&sx,&sy,&sz,&p)) {
fprintf(stderr, "Tripoli4_input: %s: Error: Cannot get neutron %g in batch %ld.\n",NAME_CURRENT_COMP,n_neutrons,begin_batch);
exit_flag = 1;
} else {
double v,w;
/* if an energy filter is set, use it */
v = sqrt(vx*vx+vy*vy+vz*vz);
w = VS2E*v*v;
if ( (!T4_ANALYSE_EMIN && !T4_ANALYSE_EMAX)
|| (T4_ANALYSE_EMIN <= w && w <= T4_ANALYSE_EMAX) ) {
mean_x += p*x; mean_y += p*y; mean_z += p*z;
mean_vx += p*vx; mean_vy += p*vy; mean_vz += p*vz; mean_v += p*v;
angle2z += p*vz/v;
if (v) {
mean_dx += p*fabs(vx/v); mean_dy += p*fabs(vy/v); mean_dz += p*fabs(vz/v); }
if (x < min_x) min_x = x;
if (y < min_y) min_y = y;
if (z < min_z) min_z = z;
if (vx < min_vx) min_vx = vx;
if (vy < min_vy) min_vy = vy;
if (vz < min_vz) min_vz = z;
if (x > max_x) max_x = x;
if (y > max_y) max_y = y;
if (z > max_z) max_z = z;
if (vx > max_vx) max_vx = vx;
if (vy > max_vy) max_vy = vy;
if (vz > max_vz) max_vz = z;
n_neutrons_p += p;
}
n_neutrons++;
}
}
if (begin_of_batch(word)){/* if key word BEGIN_OF_BATCH is found */
if (tripoli_read_word(hfile,word) != EOF) {
begin_batch=strtol(word,NULL,0);
nbatch++;
}
}
if (result_read==EOF) { /* normal end of file */
exit_flag=1;
}
} /* end while */
if (n_neutrons) {
long end_analyse=0;
double cx,cy,cz;
double nbatch_extrapolated=0;
end_analyse = ftell(hfile);
mean_x /= n_neutrons_p;
mean_y /= n_neutrons_p;
mean_z /= n_neutrons_p;
mean_vx /= n_neutrons_p;
mean_vy /= n_neutrons_p;
mean_vz /= n_neutrons_p;
mean_dx /= n_neutrons_p;
mean_dy /= n_neutrons_p;
mean_dz /= n_neutrons_p;
mean_v /= n_neutrons_p;
angle2z /= n_neutrons_p;
/* now estimates total ncount */
if (T4_ANALYSE>0) {
n_count_extrapolated = n_neutrons*fabs(filesize-first_batch)/(end_analyse - first_batch);
nbatch_extrapolated = nbatch *fabs(filesize-first_batch)/(end_analyse - first_batch);
} else {
n_count_extrapolated = n_neutrons;
nbatch_extrapolated = nbatch;
}
if (verbose) {
double mean_k, mean_w=0, mean_L=0;
mean_k = V2K*mean_v;
if (mean_k) mean_L = 2*PI/mean_k;
mean_w = VS2E*mean_v*mean_v;
printf("Tripoli4 file %s\nContains %s%g neutrons in %ld batches of size %ld\n",
filename, T4_ANALYSE ? "about " : "",
n_count_extrapolated, (long)nbatch_extrapolated, nsize);
if (n_count_extrapolated > mcget_ncount())
printf(" (will use only %.3g %% of file)\n", 100.0*mcget_ncount()/n_count_extrapolated);
else
printf(" (limiting simulation to %g neutrons)\n", n_count_extrapolated*repeat_count);
printf(" Source size (full width in [m]): ");
printf(" dX=%g dY=%g dZ=%g\n", max_x-min_x, max_y-min_y, max_z-min_z);
if (fabs((max_x-min_x)*(max_y-min_y)) < 1e-6 && radius <= 0)
printf("WARNING: source area is a point. Use radius > 0 to make it a disk\n");
printf(" Source center (in [m]): ");
printf(" X0=%g Y0=%g Z0=%g\n", mean_x, mean_y, mean_z);
printf(" Beam velocity divergence (half width in [deg]):");
printf(" dVx=%g dVy=%g dVz=%g\n",
atan(mean_dx)*RAD2DEG,
atan(mean_dy)*RAD2DEG,
atan(mean_dz)*RAD2DEG);
printf(" Beam speed (in [m/s]): ");
printf(" Vx=%g Vy=%g Vz=%g\n", mean_vx, mean_vy, mean_vz);
printf(" Beam mean energy:\n");
printf(" speed=%g [m/s] energy=%g [meV]\n wavelength=%g [Angs] wavevector=%g [Angs-1]\n", mean_v, mean_w, mean_L, mean_k);
}
if (autocenter) {
if (strstr(autocenter, "rotate") || strstr(autocenter, "orient")) {
do_rotate = 1;
}
if (strstr(autocenter, "translate") || strstr(autocenter, "center"))
do_translate = 1;
if (strstr(autocenter, "rescale") && intensity && nbatch_extrapolated && nsize) {
intensity_extrapolated = fabs(intensity/nbatch_extrapolated/nsize);
printf("* Automatic Normalisation factor Intensity/N/B = %g [n/s]\n",
intensity_extrapolated);
}
}
/* compute the rotation matrix to make mean_v along the Z-axis */
/* first normalize mean velocity (will be Z axis): c=v/|v| */
cx = mean_vx/mean_v; cy = mean_vy/mean_v; cz = mean_vz/mean_v;
/* compute angle to rotate in order to come back to Z axis */
// angle2z = acos(cz); /* in RAD */
angle2z = acos(angle2z);
/* get rotation axis b=c x [0 0 1] */
if (angle2z) {
vec_prod(bx,by,bz, cx,cy,cz, 0,0,1);
} else { /* already well oriented: nothing to do */
do_rotate = 0;
}
if (verbose && (do_rotate || do_translate || smooth)) {
printf("* Beam will be ");
if (do_translate) printf("translated (in position) ");
if (do_rotate) printf("rotated (%.3g [deg] to Z-axis) ", angle2z*RAD2DEG);
if (smooth) printf("smoothed ");
printf("\n");
}
} else {
fprintf(stderr, "Tripoli4_input: %s: Error: file %s neutrons does not contains any neutron. \n",NAME_CURRENT_COMP, filename);
exit(-1);
}
begin_batch = 0; nbatch=0;
/* reposition at start of file (batch start) */
if (fseek(hfile, first_batch,SEEK_SET)) {
fprintf(stderr, "Tripoli4_input: %s: Error: Can not reset Tripoli4 file (fseek error at analyse). \n",NAME_CURRENT_COMP);
exit_flag = 1;
}
#if defined (USE_MPI)
if (!smooth && mpi_node_count > 1) {
if (verbose)
printf("Tripoli4_input: %s: smoothing (smooth=1) is recommended when running MPI execution\n", NAME_CURRENT_COMP);
}
#endif
double min_dv=fabs(max_vx-min_vx);
if (min_dv > fabs(max_vy-min_vy)) min_dv = fabs(max_vy-min_vy);
if (min_dv > fabs(max_vz-min_vz)) min_dv = fabs(max_vz-min_vz);
min_vx = min_dv;
} /* non-empty file */
repeat_cnt = repeat_count;
#if defined (USE_MPI)
repeat_cnt = ceil(1.0*repeat_cnt/mpi_node_count);
#endif
%}
TRACE
%{
char exit_flag=0; /* set to 1 if end of simulation */
int result_read;
char word[T4_WORDSIZE];
while(1) {
result_read=tripoli_read_word(hfile,word);
if (is_neutron(word)) { /* if key word NEUTRON is found */
if (tripoli_create_neutron(hfile,&x,&y,&z,&vx,&vy,&vz,&t,&sx,&sy,&sz,&p)) {
fprintf(stderr, "Virtual_tripoli4_input: %s: Error: Cannot create neutron in batch %ld.\n",NAME_CURRENT_COMP,begin_batch);
fprintf(stderr," Finishing simulation\n");
exit_flag = 1;
} else {
if (do_translate) { /* translate the beam to origin */
x -= mean_x; y -= mean_y; z -= mean_z;
}
if (radius > 0) /* force a disk source area */
{
double chi,r;
chi=2*PI*rand01(); /* Choose point on source */
r=sqrt(rand01())*radius; /* with uniform distribution. */
x=r*cos(chi);
y=r*sin(chi);
}
if (do_rotate) { /* rotate the beam so that its main axis is along Z */
double nvx, nvy, nvz;
rotate(nvx,nvy,nvz, vx,vy,vz, angle2z, bx,by,bz);
vx = nvx; vy=nvy; vz=nvz;
rotate(nvx,nvy,nvz, x, y, z, angle2z, bx,by,bz);
x = nvx; y=nvy; z=nvz;
}
}
if (intensity_extrapolated) p *= fabs(intensity_extrapolated/repeat_cnt);
SCATTER;
break;
}
if (end_of_batch(word)) { /* if key word END_OF_BATCH is found */
if (tripoli_read_word(hfile,word) != EOF) {
/* this is the number of finishing batch */
end_batch=strtol(word,NULL,0);
if (end_batch!=begin_batch && begin_batch) {
/* finishing batch does not match the one we were reading ! */
fprintf(stderr, "Tripoli4_input: %s: Warning: inconsistent batch numbers between END(%ld) and BEGIN(%ld).\n", NAME_CURRENT_COMP, end_batch,begin_batch);
} else nbatch++;
}
else {
fprintf(stderr, "Tripoli4_input: %s: Expect 'END_OF_BATCH', found '%s' (after batch %ld).", NAME_CURRENT_COMP, word, begin_batch);
exit_flag = 1;
}
}
if (begin_of_batch(word)){/* if key word BEGIN_OF_BATCH is found */
if (tripoli_read_word(hfile,word) != EOF) {
begin_batch=strtol(word,NULL,0);
}
else {
fprintf(stderr, "Tripoli4_input: %s: Expect 'BEGIN_OF_BATCH', found '%s' (after batch %ld).", NAME_CURRENT_COMP, word, begin_batch);
exit_flag = 1;
}
}
#if defined (USE_MPI)
if (smooth && n_count_extrapolated)
#else
if (smooth && rep > 1 && n_count_extrapolated)
#endif
{
/* apply smmothing */
x += randnorm()*(max_x-min_x)/n_count_extrapolated/2;
y += randnorm()*(max_y-min_y)/n_count_extrapolated/2;
z += randnorm()*(max_z-min_z)/n_count_extrapolated/2;
vx += randnorm()*min_vx/n_count_extrapolated/2;
vy += randnorm()*min_vx/n_count_extrapolated/2;
vx += randnorm()*min_vx/n_count_extrapolated/2;
}
if (result_read==EOF) { /* normal end of file */
rep++;
if (rep <= repeat_cnt) {
/* reposition at start of file (batch start) */
int ret = fseek(hfile, first_batch,SEEK_SET);
if (ret) {
fprintf(stderr, "Tripoli4_input: %s: Error: Can not repeat Tripoli4 file (fseek error at repeat %d). \n",NAME_CURRENT_COMP, rep);
exit_flag = 1;
}
result_read = tripoli_read_word(hfile,word); /* should be batch start */
begin_batch=strtol(word,NULL,0);
if (verbose) printf("Tripoli4_input: %s: Start Batch Number %ld (iteration %d)\n",NAME_CURRENT_COMP,begin_batch, rep);
}
else exit_flag=1;
}
#ifdef USE_MPI
/* We always repeat by the number of nodes in an MPI run */
p /= mpi_node_count;
#endif
if (exit_flag) { mcset_ncount(mcget_run_num()); ABSORB; }
} /* end while */
%}
FINALLY
%{
if (strcmp(filename,"")) {
if (head) free(head);
if (hfile) fclose(hfile);
if (verbose) {
printf("Tripoli4_input: %s: \n", NAME_CURRENT_COMP);
printf(" %g neutrons generated\n", (double)mcget_ncount());
printf(" %ld read batch (B) of intial %ld neutrons (N)\n",nbatch, nsize);
if (nbatch && nsize && intensity && !intensity_extrapolated)
printf("* Normalisation factor Intensity/N/B = %g [n/s]\n", intensity/nbatch/nsize);
}
}
%}
MCDISPLAY
%{
double width =(max_x-min_x)/2;
double height=(max_y-min_y)/2;
multiline(5, -width/2.0, -height/2.0, 0.0,
width/2.0, -height/2.0, 0.0,
width/2.0, height/2.0, 0.0,
-width/2.0, height/2.0, 0.0,
-width/2.0, -height/2.0, 0.0);
%}
END
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