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Index: mdanalysis/testsuite/MDAnalysisTests/coordinates/test_copying.py
===================================================================
--- mdanalysis.orig/testsuite/MDAnalysisTests/coordinates/test_copying.py 2025-04-17 00:46:21.914982368 +0200
+++ mdanalysis/testsuite/MDAnalysisTests/coordinates/test_copying.py 2025-04-17 00:47:21.515232819 +0200
@@ -61,7 +61,9 @@
XYZ_mini,
)
from MDAnalysis.coordinates.core import get_reader_for
-from MDAnalysis.coordinates.GSD import HAS_GSD
+# gsd causes timeouts. Explicitly disable gsd tests. https://github.com/MDAnalysis/mdanalysis/issues/4209
+#from MDAnalysis.coordinates.GSD import HAS_GSD
+HAS_GSD=False
from MDAnalysis.auxiliary.EDR import HAS_PYEDR
Index: mdanalysis/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py
===================================================================
--- mdanalysis.orig/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py 2025-04-17 00:46:21.914982368 +0200
+++ mdanalysis/testsuite/MDAnalysisTests/parallelism/test_multiprocessing.py 2025-04-17 00:46:21.910982332 +0200
@@ -32,7 +32,9 @@
import MDAnalysis as mda
import MDAnalysis.coordinates
from MDAnalysis.coordinates.core import get_reader_for
-from MDAnalysis.coordinates.GSD import HAS_GSD
+# gsd causes timeouts. Explicitly disable gsd tests. https://github.com/MDAnalysis/mdanalysis/issues/4209
+#from MDAnalysis.coordinates.GSD import HAS_GSD
+HAS_GSD=False
from MDAnalysis.analysis.rms import RMSD
from MDAnalysisTests.datafiles import (
Index: mdanalysis/testsuite/MDAnalysisTests/utils/test_pickleio.py
===================================================================
--- mdanalysis.orig/testsuite/MDAnalysisTests/utils/test_pickleio.py 2025-04-17 00:46:21.914982368 +0200
+++ mdanalysis/testsuite/MDAnalysisTests/utils/test_pickleio.py 2025-04-17 00:46:21.910982332 +0200
@@ -36,7 +36,9 @@
bz2_pickle_open,
gzip_pickle_open,
)
-from MDAnalysis.coordinates.GSD import GSDPicklable, gsd_pickle_open, HAS_GSD
+# gsd causes timeouts. Explicitly disable gsd tests. https://github.com/MDAnalysis/mdanalysis/issues/4209
+#from MDAnalysis.coordinates.GSD import GSDPicklable, gsd_pickle_open, HAS_GSD
+HAS_GSD=False
from MDAnalysis.coordinates.TRJ import (
NCDFPicklable,
)
|
