1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
|
version: ~> 1.0
language: generic
group: travis_latest
# Only build for develop
branches:
only:
- develop
matrix:
fast_finish: true
include:
- python: 3.8
name: "Power PC"
os: linux
arch: ppc64le
if: type = cron
before_install:
- wget https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-ppc64le.sh -O miniconda.sh
- mkdir $HOME/.conda
- bash miniconda.sh -b -p $HOME/miniconda
- $HOME/miniconda/bin/conda init bash
# for some reason the image does not like sourcing .bashrc
- . "/home/travis/miniconda/etc/profile.d/conda.sh"
- conda activate base
- conda update --yes conda
- conda install --yes pip pytest==6.1.2 mmtf-python biopython networkx cython matplotlib-base "scipy>=1.6" griddataformats hypothesis gsd codecov -c conda-forge -c biobuilds
- pip install pytest-xdist packaging threadpoolctl fasteners
- conda info
install:
- (cd package/ && python setup.py develop) && (cd testsuite/ && python setup.py install)
script:
- pytest testsuite/MDAnalysisTests --disable-pytest-warnings -n 2
after_sucess:
- echo "Override this stage for now"
- os: linux
language: python
arch: arm64-graviton2
python: 3.8
name: "ARM64"
dist: focal
virt: vm
group: edge
if: type = cron
before_install:
- python -m pip install cython "numpy>=1.20.0" scipy
- python -m pip install --no-build-isolation hypothesis matplotlib packaging pytest pytest-cov pytest-xdist tqdm threadpoolctl fasteners
install:
- cd package
- python setup.py install
- cd ../testsuite
- python setup.py install
- cd ..
script:
- cd testsuite
- python -m pytest ./MDAnalysisTests --disable-pytest-warnings -n 8 -rsx --cov=MDAnalysis
after_success:
- echo "Override this stage for ARM64"
|
