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.. _loading:
Trajectory Reference
====================
Loading molecular dynamics trajectories is easy with MDTraj. ::
>>> import mdtraj as md
>>> t = md.load('trajectory.pdb')
The function :func:`mdtraj.load` will automatically detect the appropriate
format based on the filename extension. The supported formats are all
listed below in the format-specific loaders. The return value of
:func:`mdtraj.load` is an :class:`mdtraj.Trajectory` object.
While :func:`mdtraj.load` will read an entire trajectory into memory, other
functions like :func:`mdtraj.iterload` and :func:`mdtraj.open` are
available for working with trajectories in chunks, without loading them
entirely into memory all at once.
Internal representation
-----------------------
.. currentmodule:: mdtraj
.. autosummary::
:toctree: api/generated/
Trajectory
Topology
Format-agnostic loading functions
---------------------------------
.. currentmodule:: mdtraj
.. autosummary::
:toctree: api/generated/
load
iterload
load_frame
open
join
Format-specific loading functions
---------------------------------
.. autosummary::
:toctree: api/generated/
load_lh5
load_pdb
load_xml
load_arc
load_dcd
load_dtr
load_hdf5
load_netcdf
load_trr
load_xtc
load_prmtop
load_xyz
load_lammpstrj
load_hoomdxml
.. vim: tw=75
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