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Source: megadepth
Standards-Version: 4.7.2
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
Steffen Moeller <moeller@debian.org>,
Section: science
Priority: optional
Build-Depends:
debhelper-compat (= 13),
cmake,
libhts-dev,
libdeflate-dev,
libbigwig-dev,
Vcs-Browser: https://salsa.debian.org/med-team/megadepth
Vcs-Git: https://salsa.debian.org/med-team/megadepth.git
Homepage: https://github.com/ChristopherWilks/megadepth
Rules-Requires-Root: no
Package: megadepth
Architecture: any
Depends:
${shlibs:Depends},
${misc:Depends},
Suggests:
r-bioc-megadepth,
Description: computes coverage from BigWig and BAM sequencing files
A major concern for the interpretation of DNA and RNA (!) sequencing is
the number of reads that cover a particular area. This package
has interesting statistics for the distinction of coding and non-coding
parts of the genome and knows how to interpret transcripts that
span multiple exons.
.
This package is a successor of the program 'bamcount'.
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