package info (click to toggle)
megadepth 1.2.0-5
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 980 kB
  • sloc: cpp: 4,701; sh: 717; ansic: 170; perl: 49; makefile: 20

Folder: 1.2.0-5

show hidden (1)
d .. (parent)
d d rwxr-xr-x 30 .github
d d rwxr-xr-x 135 .pc
d d rwxr-xr-x 30 conda
d d rwxr-xr-x 4,096 debian
d d rwxr-xr-x 10 htslib_ci
d d rwxr-xr-x 41 junctions
d d rwxr-xr-x 10 libBigWig_ci
d d rwxr-xr-x 10 libdeflate_ci
d d rwxr-xr-x 4,096 sample_aggregation
d d rwxr-xr-x 4,096 tests
d d rwxr-xr-x 10 zlib_ci
- - rw-r--r-- 99 .gitignore
- - rw-r--r-- 337 .gitmodules
- - rw-r--r-- 1,488 CMakeLists.txt.ci
- - rw-r--r-- 901 CMakeLists.txt.static
- - rw-r--r-- 763 CMakeLists.txt.statlib
- - rw-r--r-- 1,254 CMakeLists.txt.windows
- - rw-r--r-- 200 Dockerfile.build
- - rw-r--r-- 1,537 Dockerfile.osxcross
- - rw-r--r-- 193 Dockerfile.run
- - rw-r--r-- 919 Dockerfile.windows
- - rw-r--r-- 1,168 LICENSE.txt
- - rw-r--r-- 22,044 README.md
- - rw-r--r-- 6 VERSION
- - rwxr-xr-x 2,658 build_megadepth.sh
- - rwxr-xr-x 2,561 build_no_container_hbb.sh
- - rwxr-xr-x 2,091 build_no_container_macos.sh
- - rwxr-xr-x 2,532 build_no_container_windows.sh
- - rw-r--r-- 3,777 countdecimaldigit.h
- - rw-r--r-- 3,596 countlut.hpp
- - rwxr-xr-x 372 create_docker_to_run_megadepth.sh
- - rw-r--r-- 1,978 digitslut.h
- - rwxr-xr-x 49 docker_build.sh
- - rwxr-xr-x 637 entry.sh
- - rwxr-xr-x 1,910 get_htslib.sh
- - rwxr-xr-x 817 get_libBigWig.sh
- - rwxr-xr-x 829 get_libdeflate.sh
- - rwxr-xr-x 304 get_zlib.sh
- - rw-r--r-- 1,224 getline.c
- - rw-r--r-- 272 getline.h
- - rwxr-xr-x 150 megadepth
- - rw-r--r-- 154,166 megadepth.cpp
- - rw-r--r-- 109,803 megadepth_detailed.png
- - rw-r--r-- 17,072 megadepth_logo.png
- - rwxr-xr-x 148 megadepthd
- - rwxr-xr-x 257 release.sh
- - rw-r--r-- 83,354 robin_hood.h
- - rwxr-xr-x 56 run.sh
- - rwxr-xr-x 279 run_hbb_build_container.sh
- - rwxr-xr-x 218 run_macos_build_container.sh
- - rwxr-xr-x 220 run_windows_build_container.sh