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Source: megan-ce
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>,
Pierre Gruet <pgt@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
javahelper,
default-jdk,
ant,
imagemagick,
libjloda-java,
libcolt-free-java,
libcommons-math3-java,
libjama-java,
libgoogle-gson-java,
libjbcrypt-java,
libopenjfx-java,
libxerial-sqlite-jdbc-java
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/megan-ce
Vcs-Git: https://salsa.debian.org/med-team/megan-ce.git
Homepage: https://github.com/danielhuson/megan-ce
Rules-Requires-Root: no
Package: megan-ce
Architecture: all
Depends: default-jre,
${java:Depends},
libjloda-java,
libjbcrypt-java,
libopenjfx-java,
libxerial-sqlite-jdbc-java,
${misc:Depends}
Description: interactive tool to explore and analyse microbiome sequencing data
MEGAN Community Edition is a shotgun sequencer to analyze microbiome samples.
It is a rewrite and extension of the widely-used microbiome analysis tool
MEGAN so as to facilitate the interactive analysis of the taxonomic and
functional content of very large microbiome datasets. Other new features
include a functional classifier called InterPro2GO, gene-centric read
assembly, principal coordinate analysis of taxonomy and function, and support
for metadata. By integrating MEGAN CE with the high-throughput DNA-to-protein
alignment tool DIAMOND a powerful and complete pipeline for the analysis of
metagenome shotgun sequences can be provided.
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