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#/******************************************************************************
# * Makefile for melting v4.3b *
# * This program computes for a nucleotide probe, the enthalpy, the entropy *
# * and the melting temperature of the binding to its complementary template. *
# * Three types of hybridisation are possible: DNA/DNA, DNA/RNA, and RNA/RNA. *
# * Copyright (C) Nicolas Le Novère and Marine Dumousseau 1997-2009*
# ******************************************************************************/
#
#/* This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
#
# Nicolas Le Novère and Marine Dumousseau
# Computational Neurobiology, EMBL-EBI, Wellcome-Trust Genome Campus
# Hinxton CB10 1SD United-Kingdom. e-mail: lenov@ebi.ac.uk
#*/
srcdir = SRC
# where to find the files containing the sets of nearest_neighbor parameters.
# progra~1 means "Program Files". Check that you have no
# directory "progra" followed by something alphabetically inferior
NN_DIR = c:/progra~1/melting/nnfiles
VPATH = $(srcdir)
# Here add your compiler name and the chosen options
CC = gcc
# options to produce the release version
CFLAGS = -Wall -pedantic -O3 -DNN_BASE=\"$(NN_DIR)\"
# options to produce a version to debug and prof
#CFLAGS = -Wall -pedantic -g -DNN_BASE=\"$(NN_DIR)\"
OBJECTS = melting.o decode.o calcul.o
melting : $(OBJECTS)
$(CC) $(CFLAGS) -o melting $(OBJECTS) -lm
$(OBJECTS) : common.h
melting.o : melting.c melting.h
decode.o : decode.c decode.h
calcul.o : calcul.c calcul.h
install :
.PHONY : clean
clean :
del melting
del melting.o
del decode.o
del calcul.o
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