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Source: melting
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
javahelper,
ant,
ant-optional,
default-jdk,
Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/melting
Vcs-Git: https://salsa.debian.org/med-team/melting.git
Homepage: https://www.ebi.ac.uk/compneur-srv/melting/
Rules-Requires-Root: no
Package: melting
Architecture: all
Depends: ${java:Depends},
${misc:Depends},
default-jre | java-runtime,
java-wrappers
Suggests: melting-gui
Description: compute the melting temperature of nucleic acid duplex
This program computes, for a nucleic acid duplex, the enthalpy, the
entropy and the melting temperature of the helix-coil
transitions. Three types of hybridisation are possible: DNA/DNA,
DNA/RNA, and RNA/RNA. The program first computes the hybridisation
enthalpy and entropy from the elementary parameters of each Crick's
pair by the nearest-neighbor method. Then the melting temperature is
computed. The set of thermodynamic parameters can be easily changed,
for instance following an experimental breakthrough.
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