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.\" DO NOT MODIFY THIS FILE! It was generated by help2man 1.47.15.
.TH CONTIGOVERLAPS "1" "May 2020" "contigOverlaps 2.15" "User Commands"
.SH NAME
contigOverlaps \- ContigOverlaps nosha
.SH SYNOPSIS
.B contigOverlaps
\fI\,<options> firstAssemblyBams.fofn secondAssemblyBams.fofn \/\fR[ ... ]
.SH OPTIONS
.TP
\fB\-\-help\fR
print out this message
.TP
\fB\-\-percentIdentity\fR
arg The minimum end\-to\-end % identity of qualifying reads (default: 97)
.SH AUTHOR
This manpage was written by Andreas Tille for the Debian distribution and
can be used for any other usage of the program.
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