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from distutils.core import setup, Extension
from distutils.cmd import Command
from distutils.command.install_data import install_data
from distutils.command.build import build
from distutils.command.sdist import sdist
from glob import glob
from distutils.command.build_ext import build_ext
import sys, os
from os import path
pack_name = "geomutils"
platform = sys.platform
########################################################################
# Had to overwrite the run method of the install_data to install the data file
# in the package instead of a particular data directory
########################################################################
class modified_install_data(install_data):
def run(self):
install_cmd = self.get_finalized_command('install')
self.install_dir = getattr(install_cmd, 'install_lib')
return install_data.run(self)
#####################################################################
# Had to overwrite the prune_file_list method of sdist to not
# remove automatically the RCS/CVS directory from the distribution.
####################################################################
class modified_sdist(sdist):
def prune_file_list(self):
build = self.get_finalized_command('build')
base_dir = self.distribution.get_fullname()
self.filelist.exclude_pattern(None, prefix=build.build_base)
self.filelist.exclude_pattern(None, prefix=base_dir)
########################################################################
# Had to overwrite the sub_commands list of the build command so that
# the build_py is called after build_clib and build_ext. This way
# when building the extension the .py is generated before the other
# py module are. This avoid to have to first call build then install.
########################################################################
class modified_build(build):
sub_commands = [('build_clib', build.has_c_libraries),
('build_ext', build.has_ext_modules),
('build_py', build.has_pure_modules),
('build_scripts', build.has_scripts),
]
########################################################################
# list of the python packages to be included in this distribution.
# sdist doesn't go recursively into subpackages so they need to be
# explicitaly listed.
# From these packages only the python modules will be taken
packages = ['geomutils', 'geomutils.Tests', 'geomutils.Tests.Data']
# list of the python modules not part of a package. Give the path and the
# filename without the extension. i.e you want to add the
# test.py module which is located in MyPack/Tests/ you give
# 'MyPack/Tests/test'
py_modules = []
# list of the Macros
definemacros = []
if platform == 'sunos5':
definemacros.append(('sqrtf', 'sqrt'))
if platform == 'win32':
definemacros.append(('sqrtf', 'sqrt'))
definemacros.append(('NO_DRAND48', None))
definemacros.append(('random', 'rand'))
definemacros.append(('srandom', 'srand'))
class modified_build_ext (build_ext):
def spawn(self, cmd, search_path=1, level=1):
cmd.insert(-1, "-outdir")
cmd.insert(-1, pack_name)
print "command: ", cmd
apply(build_ext.spawn, (self, cmd), {})
def build_extension(self, ext):
comp_modif = 0
swig_cpp = self.swig_cpp
language = self.compiler.detect_language(ext.sources)
print "language: ", language
if language == "c++":
if platform != "win32":
comp = self.compiler.compiler[0]
if comp == "gcc":
self.compiler.compiler[0] = 'g++'
self.compiler.compiler_so[0] = 'g++'
self.compiler.linker_so[0] = 'g++'
elif comp == "cc":
self.compiler.compiler[0] = 'CC'
self.compiler.compiler_so[0] = 'CC'
self.compiler.linker_so[0] = 'CC'
self.swig_cpp = 1
comp_modif = 1
build_ext.build_extension(self, ext)
if comp_modif:
if platform != "win32":
if comp == "gcc":
self.compiler.compiler[0] = 'gcc'
self.compiler.compiler_so[0] = 'gcc'
self.compiler.linker_so[0] = 'gcc'
elif comp == "cc":
self.compiler.compiler[0] = 'cc'
self.compiler.compiler_so[0] = 'cc'
self.compiler.linker_so[0] = 'cc'
self.swig_cpp = swig_cpp
if platform == 'win32':
libs =[]
elif platform == 'darwin':
libs = ["mx"]
else:
libs=["m"]
efit_srcfiles = []
for f in ["efit.c", "efit_aux.c", "efit_io.c", "vec.c"]:
efit_srcfiles.append(path.join("src", "efit", f))
efit_srcfiles.append(path.join("geomutils", "efitlib.i"))
import numpy
numpy_include = numpy.get_include()
efit_ext = Extension ("_efitlib", efit_srcfiles,
include_dirs = [path.join("src", "efit"),numpy_include],
define_macros = definemacros,
libraries = libs
)
geomalg_libs = []
geomalg_srcfiles = []
geomalg_comp_args = []
geomalg_link_args = []
for f in ["point.cpp", "Vector.cpp", "distance.cpp", "intersections.cpp",
"polygonArea.cpp", "boundingContainers.cpp",
"objfile.cpp"
]:
geomalg_srcfiles.append(path.join("src", "geomAlgorithms", f))
geomalg_srcfiles.append(path.join("geomutils", "geomalgorithms.i"))
if platform == "sunos5":
geomalg_libs.extend(["Crun", "Cstd"])
elif platform == "irix6":
geomalg_comp_args.append( "-LANG:std" )
geomalg_link_args.append("-LANG:std")
elif platform == "win32":
geomalg_comp_args.extend(["/MT"])
geomalg_ext = Extension("_geomalgorithms", geomalg_srcfiles,
include_dirs = [path.join("src", "geomAlgorithms"),
numpy_include],
define_macros = [],
libraries = geomalg_libs,
extra_compile_args = geomalg_comp_args,
extra_link_args=geomalg_link_args
)
sdf_ext = Extension ("_sdflib", [path.join("geomutils", "sdf.i")],
include_dirs = [path.join("src", "efit"),
numpy_include],
define_macros = [],
libraries = []
)
########################################################################
# description of what is going to be included in the distribution and
# installed.
try:
from version import VERSION
except:
VERSION = "1.0"
if platform == "win32":
all_modules = [efit_ext, geomalg_ext]
else:
all_modules = [efit_ext, geomalg_ext, sdf_ext]
dist = setup(name=pack_name,
version=VERSION,
description = "geomutils library",
author = 'Molecular Graphics Laboratory',
author_email = 'mgltools@scripps.edu',
download_url = 'http://www.scripps.edu/~sanner/software/packager.html',
url = 'http://www.scripps.edu/~sanner/software/index.html',
packages = packages,
py_modules = py_modules,
cmdclass = {'build': modified_build,
'build_ext': modified_build_ext,
'sdist' : modified_sdist,
},
ext_package = "geomutils",
ext_modules = all_modules#[efit_ext, geomalg_ext, sdf_ext],
)
# Remove the .py and wrap.c files generated by swig from the
# MyPack directory
## import os
## pyName = './%s/%slib.py'%(pack_name, pack_name)
## if os.path.exists(pyName):
## os.system("rm -f %s"%pyName)
## print "Removing %s generated by swig"%pyName
## wrapName = './%s/%slib_wrap.c'%(pack_name, pack_name)
## if os.path.exists(wrapName):
## os.system("rm -f %s"%wrapName)
## print "Removing %s generated by swig"%wrapName
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