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/** \mainpage MIA - plug-in based framework for gray-scale and medical image processing
\section intro_sec Introduction
The MIA provides a framwork for common tasks in gray scale images processing
including image filtering and image registration for 2D and 3D images.
This is the documentation of the public interface of the according libraries.
In addition to this library interface there exist a number of plug-ins and
programs make use if the interface and can be run to execute certain
image processing tasks.
For information about these programs and plug-ins please see the user guide
at https://sourceforge.net/apps/mediawiki/mia/index.php?title=Mia_-_A_tool_chain_for_Medical_Image_Analysis
\author Gert Wollny gw.fossdev@gmail.com
If you use this software to prepare a scientific publication, please reference it as
Gert Wollny, "MIA - A plugin-based Framework for Medical Image Processing", http://mia.sf.net
\section naming_sec About naming schemes
The following naming scheme is employed for most of the classes and data structurs:
Names for template classes that provide interfaces start with a capital "T" e.g. TShape, or TFactory.
Names of classes start with a capital "C" like CSegSet, or CSplineKernel.
Classes and structures that work as functors are named starting with a capital "F", e.g. FMeanValue.
Names of PODs (plain old data structures) begin with a "S".
Exceptions to this rule will be renamed in time.
Classes and structures that start with two underscores, like __type_descr are traits, or other classes that are used
for template meta programming, i.e. the type based dispaching of function class.
\section naming_sec_files File names
C++ Header files use the suffix ".hh", C++ implementation files use ".cc".
For specific template implementations are only included for explicit template instanciations, the
files use the suffic ".cxx".
File names do not necessarily correspond directly to classes defined and implemented in these files,
but usually hint at the funcionallity provided.
A file may contain more then one class and additional functions that are closely linked.
\defgroup basic Basic data strctures and functions
\brief Basic data structures for data and meta-data handling
\defgroup cmdline Command line and parameter parsing
\brief These classes and functions relate to the parsing of the command line and the parameter parsing for plug-ins
\defgroup filtering Filtering and combining
\brief These classes and functions are related to filtering and combining of 2D and 3D images.
\defgroup io Input/output of files
\brief Input and output of images
\defgroup registration Image Registration and Transformation
\brief Comparison, registration, and transformation of images
\defgroup interpol Interpolation
\brief These classes deal with the tasks related to interpolation
\defgroup logging Logging and debugguing
\brief Classes and functions that are used for textual output
\defgroup perf Perfusion Analysis
\brief Classes and functions related to the analyis of perfusion data
\defgroup plugin Plug-in handling
\brief Classes and functions that implement the plug-in infrastructure
\defgroup traits Template metaprogramming classes
\defgroup tests Test classes and functions
\defgroup misc Uncategorized
*/
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