File: runMe.sh

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microbiomeutil 20101212%2Bdfsg1-4
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#!/bin/sh

# remove any preexisting outputs from an earlier run.
rm -f chims.NAST.CPS*
rm -f tmp.*

perl -I../PerlLib ../ChimeraSlayer.pl --query_NAST chims.NAST --printCSalignments --printFinalAlignments