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MINC Tools
This package is a collection of tools that work on MINC format
images.
* rawtominc, minctoraw, mincextract - format conversion
* mincheader, mincdiff, mincinfo, minchistory - file information
* mincedit, minc_modify_header - header manipulation
* mincresample - arbitrary volume resampling
* mincreshape - extraction of volume sub-cubes, image flipping,
dimension re-ordering, type conversion
* mincconcat - concatenating or interleaving images from multiple
files
* mincmath - perform simple math on files
* minccalc - perform more complicated math on files through an expression
* mincaverage - average minc files
* mincstats - calculate statistics across voxels of a file
* minclookup - lookup table operations for arbitrary re-mappings of
intensities
* worldtovoxel, voxeltoworld - coordinate conversion
* xfmconcat, xfminvert - generalized transformation utilities
* mincview - simple image display using xv or ImageMagick
* mincpik - generate picture from slice through volume
INSTALLATION
Compilation and installation is now done with CMake. Use these steps:
1. Compile
$ cmake CMakeLists.txt
$ make
Note that if you have installed libminc in a non-standard location
(in this case /opt/local/minc) you will have to tell CMake where to find
it as such:
$ export LIBMINC_DIR=/opt/local/minc
$ cmake CMakeLists.txt
$ make
Similarly if you'd like to install minc-tools in this same location you
will need to do this:
$ export LIBMINC_DIR=/opt/local/minc
$ cmake -DCMAKE_INSTALL_PREFIX:PATH=/opt/local/minc CMakeLists.txt
$ make
2. Install
$ sudo make install
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