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#
# VTML_80
#
# This matrix was produced from: vtml_80qij.mat using vtml_P.mat background frequencies
#
# VTML_80 substitution matrix, Units = bits/2.0
# Expected score = -1.134601 bits; Entropy = 1.427882 bits
# Target fraction identity = 0.5015
# Lowest Score = -9, Highest Score= 11
#
# Background (precomputed optional): 0.0786 0.0178 0.0476 0.0624 0.034 0.0616 0.0203 0.0523 0.055 0.1045 0.0231 0.0402 0.0403 0.034 0.0462 0.07 0.0572 0.0784 0.0158 0.0374 0.00001
# Lambda (precomputed optional): 0.34657
# Avg SeqId (precomputed optional): 0.49301
A C D E F G H I K L M N P Q R S T V W Y X
A 5 0 -2 -2 -4 -1 -3 -3 -2 -3 -2 -2 -1 -2 -3 1 0 0 -5 -4 -1
C 0 10 -7 -7 -6 -3 -3 -2 -6 -5 -1 -4 -4 -6 -4 0 -2 0 -8 -1 -1
D -2 -7 7 2 -9 -2 -1 -7 -2 -8 -5 1 -2 -1 -5 -1 -2 -5 -7 -7 -1
E -2 -7 2 6 -7 -3 -2 -5 0 -5 -4 -1 -2 2 -3 -1 -2 -4 -8 -4 -1
F -4 -6 -9 -7 8 -6 -1 -1 -7 0 0 -5 -5 -4 -6 -3 -4 -2 1 3 -1
G -1 -3 -2 -3 -6 7 -3 -8 -3 -7 -6 -1 -4 -4 -3 -1 -4 -5 -5 -6 -1
H -3 -3 -1 -2 -1 -3 9 -5 -1 -3 -5 0 -3 1 0 -1 -2 -4 -2 1 -1
I -3 -2 -7 -5 -1 -8 -5 6 -5 1 1 -5 -6 -5 -5 -5 -2 3 -3 -3 -1
K -2 -6 -2 0 -7 -3 -1 -5 6 -4 -2 0 -2 1 3 -2 -1 -4 -5 -4 -1
L -3 -5 -8 -5 0 -7 -3 1 -4 5 2 -5 -4 -3 -4 -4 -3 0 -2 -2 -1
M -2 -1 -5 -4 0 -6 -5 1 -2 2 8 -4 -5 -2 -3 -4 -1 0 -6 -4 -1
N -2 -4 1 -1 -5 -1 0 -5 0 -5 -4 7 -4 -1 -2 1 -1 -5 -6 -2 -1
P -1 -4 -2 -2 -5 -4 -3 -6 -2 -4 -5 -4 8 -2 -3 -1 -2 -4 -5 -7 -1
Q -2 -6 -1 2 -4 -4 1 -5 1 -3 -2 -1 -2 7 1 -1 -2 -3 -8 -5 -1
R -3 -4 -5 -3 -6 -3 0 -5 3 -4 -3 -2 -3 1 7 -2 -3 -5 -4 -3 -1
S 1 0 -1 -1 -3 -1 -1 -5 -2 -4 -4 1 -1 -1 -2 5 1 -3 -4 -3 -1
T 0 -2 -2 -2 -4 -4 -2 -2 -1 -3 -1 -1 -2 -2 -3 1 6 -1 -7 -4 -1
V 0 0 -5 -4 -2 -5 -4 3 -4 0 0 -5 -4 -3 -5 -3 -1 5 -6 -4 -1
W -5 -8 -7 -8 1 -5 -2 -3 -5 -2 -6 -6 -5 -8 -4 -4 -7 -6 11 1 -1
Y -4 -1 -7 -4 3 -6 1 -3 -4 -2 -4 -2 -7 -5 -3 -3 -4 -4 1 8 -1
X -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1
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