1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87
|
#!/usr/bin/make -f
# DH_VERBOSE := 1
export LC_ALL=C.UTF-8
include /usr/share/dpkg/default.mk
export DEB_BUILD_MAINT_OPTIONS=hardening=+all
export DEB_CFLAGS_MAINT_APPEND+=-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3
export DEB_CXXFLAGS_MAINT_APPEND+=-DSIMDE_ENABLE_OPENMP -fopenmp-simd -O3
DEB_HOST_MULTIARCH ?= $(shell dpkg-architecture -qDEB_HOST_MULTIARCH)
binprefix=$(CURDIR)/debian/$(DEB_SOURCE)/usr/bin
libexecdir=$(prefix)/lib/$(DEB_SOURCE)
cmake_flags=-DUSE_SYSTEM_ZSTD=1 -DVERSION_OVERRIDE=$(DEB_VERSION) -DNATIVE_ARCH=0
%:
dh $@
AMD64_SIMD_LEVELS=avx2 avx sse4.1 ssse3 sse3
override_dh_auto_configure-arch:
ifeq (amd64,$(DEB_HOST_ARCH))
$(foreach SIMD,$(AMD64_SIMD_LEVELS),export CXXFLAGS="$(CXXFLAGS) -m$(SIMD)" && export CFLAGS="$(CFLAGS) -m$(SIMD)" && \
dh_auto_configure --builddirectory build_$(SIMD) -- -DEXE_SUFFIX=-$(SIMD) $(cmake_flags) && ) true
export CXXFLAGS="$(CXXFLAGS)" && export CFLAGS="$(CFLAGS)" && \
dh_auto_configure --builddirectory build_plain -- -DEXE_SUFFIX=-plain $(cmake_flags)
else
dh_auto_configure -- $(cmake_flags)
endif
override_dh_auto_configure-indep:
override_dh_auto_build-arch:
ifeq (amd64,$(DEB_HOST_ARCH))
mkdir -p $(binprefix)
$(foreach SIMD,$(AMD64_SIMD_LEVELS),dh_auto_build --builddirectory build_$(SIMD) && ) true
else
dh_auto_build
endif
override_dh_auto_build-indep:
override_dh_auto_install-arch:
ifeq (amd64,$(DEB_HOST_ARCH))
dh_install -pmmseqs2 debian/bin/simd-dispatch /usr/lib/$(DEB_SOURCE)/
$(foreach SIMD,$(AMD64_SIMD_LEVELS),dh_auto_install --builddirectory build_$(SIMD) && ) true
dh_install -pmmseqs2 usr/bin/mmseqs-* usr/bin/
set -e && cd $(binprefix) \
&& for prog in mmseqs ; do \
ln -s ../lib/$(DEB_SOURCE)/simd-dispatch $${prog} ; done
else
dh_auto_install
dh_install -pmmseqs2 usr/bin/mmseqs usr/bin/
endif
override_dh_auto_install-indep:
override_dh_auto_clean:
dh_auto_clean
rm -Rf build-*
override_dh_install-arch:
dh_install --arch
mkdir -p debian/mmseqs2/usr/lib/mmseqs2/test
cp src/test/*.index debian/mmseqs2/usr/lib/mmseqs2/test/
cp src/test/dataGap debian/mmseqs2/usr/lib/mmseqs2/test/
cp src/test/dataLinear debian/mmseqs2/usr/lib/mmseqs2/test/
#cp -r obj-$(DEB_HOST_MULTIARCH)/src/test debian/mmseqs2/usr/lib/mmseqs2/
# We also remove unneeded files & folders like CMake
rm -rf debian/mmseqs2/usr/lib/mmseqs2/test/CMakeFiles \
debian/mmseqs2/usr/lib/mmseqs2/test/*.cmake \
debian/mmseqs2/usr/lib/mmseqs2/test/Makefile
override_dh_install-indep:
dh_install --indep
# We also remove unneeded files & folders like CMake
rm -rf debian/mmseqs2-examples/usr/share/doc/mmseqs2/example-data/*.lib \
debian/mmseqs2-examples/usr/share/doc/mmseqs2/example-data/CovSeqidQscPercMinDiag.out \
debian/mmseqs2-examples/usr/share/doc/mmseqs2/example-data/CovSeqidQscPercMinDiagTargetCov.out
override_dh_gencontrol:
dh_gencontrol -- -Vsimde:Built-Using="$(shell dpkg-query -f '$${source:Package} (= $${source:Version}), ' -W "libsimde-dev")"
|