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#
# VTML_40
#
# This matrix was produced from: vtml_40qij.mat using vtml_P.mat background frequencies
#
# VTML_40 substitution matrix, Units = bits/2.0
# Expected score = -1.991667 bits; Entropy = 2.267456 bits
# Target fraction identity = 0.6960
# Lowest Score = -12, Highest Score= 12
#
# Background (precomputed optional): 0.0819 0.0169 0.0453 0.0616 0.0465 0.0745 0.0217 0.0549 0.0582 0.0905 0.0274 0.0435 0.0506 0.0375 0.0447 0.0533 0.0569 0.081 0.0132 0.0329 0.00001
# Lambda (precomputed optional): 0.34657
A C D E F G H I K L M N P Q R S T V W Y X
A 6 -1 -4 -3 -6 -2 -5 -5 -4 -5 -4 -4 -3 -3 -5 0 -1 -1 -7 -6 -1
C -1 11 -10 -10 -9 -5 -5 -3 -9 -9 -3 -6 -7 -9 -5 -2 -3 -2 -12 -3 -1
D -4 -10 8 1 -12 -4 -3 -10 -3 -11 -7 0 -4 -3 -8 -3 -4 -7 -9 -10 -1
E -3 -10 1 7 -11 -5 -4 -8 -1 -7 -6 -3 -4 1 -7 -3 -4 -6 -12 -5 -1
F -6 -9 -12 -11 8 -9 -3 -3 -10 -1 -1 -8 -7 -6 -8 -5 -6 -4 -1 2 -1
G -2 -5 -4 -5 -9 7 -5 -12 -5 -9 -8 -3 -6 -6 -5 -3 -6 -8 -7 -8 -1
H -5 -5 -3 -4 -3 -5 10 -7 -3 -5 -8 -1 -4 0 -2 -3 -4 -6 -4 0 -1
I -5 -3 -10 -8 -3 -12 -7 7 -7 0 0 -7 -8 -7 -7 -7 -3 2 -4 -5 -1
K -4 -9 -3 -1 -10 -5 -3 -7 7 -6 -4 -2 -4 0 2 -3 -3 -6 -7 -6 -1
L -5 -9 -11 -7 -1 -9 -5 0 -6 6 1 -7 -5 -4 -6 -6 -5 -1 -4 -4 -1
M -4 -3 -7 -6 -1 -8 -8 0 -4 1 9 -5 -8 -3 -4 -6 -3 -2 -9 -8 -1
N -4 -6 0 -3 -8 -3 -1 -7 -2 -7 -5 8 -6 -2 -3 -1 -2 -7 -8 -4 -1
P -3 -7 -4 -4 -7 -6 -4 -8 -4 -5 -8 -6 8 -3 -5 -2 -4 -6 -7 -11 -1
Q -3 -9 -3 1 -6 -6 0 -7 0 -4 -3 -2 -3 8 -1 -2 -3 -5 -11 -8 -1
R -5 -5 -8 -7 -8 -5 -2 -7 2 -6 -4 -3 -5 -1 8 -4 -4 -7 -6 -5 -1
S 0 -2 -3 -3 -5 -3 -3 -7 -3 -6 -6 -1 -2 -2 -4 7 1 -6 -6 -4 -1
T -1 -3 -4 -4 -6 -6 -4 -3 -3 -5 -3 -2 -4 -3 -4 1 7 -2 -11 -6 -1
V -1 -2 -7 -6 -4 -8 -6 2 -6 -1 -2 -7 -6 -5 -7 -6 -2 6 -10 -6 -1
W -7 -12 -9 -12 -1 -7 -4 -4 -7 -4 -9 -8 -7 -11 -6 -6 -11 -10 12 0 -1
Y -6 -3 -10 -5 2 -8 0 -5 -6 -4 -8 -4 -11 -8 -5 -4 -6 -6 0 9 -1
X -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1 -1
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