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########################################################################################
# #
# Author: Bertrand Neron, #
# Organization:'Biological Software and Databases' Group, Institut Pasteur, Paris. #
# Distributed under GPLv2 Licence. Please refer to the COPYING.LIB document. #
# #
########################################################################################
"""
Content the basics Mobyle Parameter types
"""
import os
import re
from types import BooleanType , StringTypes
from logging import getLogger
c_log = getLogger(__name__)
b_log = getLogger('Mobyle.builder')
import shutil
from Mobyle.Utils import safeFileName
from Mobyle.Classes.DataType import DataType
from Mobyle.Service import MobyleType
from Mobyle.MobyleError import MobyleError , UserValueError , UnDefAttrError , UnSupportedFormatError
from Mobyle.ConfigManager import Config
_cfg = Config()
def safeMask( mask ):
import string
for car in mask :
if car not in string.printable :
mask = mask.replace( car , '_')
#don't use re.UNICODE because safeFileName don't permit to use unicode char.
#we must work whit the same char set
mask = re.sub( "(;|`|$\(\s)+" , '_' , mask )
mask = re.sub( "^.*[\\\]", "" , mask )
mask = re.sub( "^/", "" , mask )
mask = re.sub( "\.(\.)+", "" , mask )
return mask
class DataTypeTemplate( DataType ):
def convert( self , value , AcceptedMobyleType , detectedMobyleType = None , paramFile= False ):
"""
cast the value to the right typeand compute the dataFormat conversion if needed (based on the
detectedMobyleType and the AcceptedMobyleType)
@param value: the value provided by the User for this parameter
@type value: String
@param acceptedMobyleType: the MobyleType with the Dataformat accepted by this service parameter
@type acceptedMobyleType: L{MobyleType} instance
@param detectedMobyleType: the MobyleType discribing the real dataformat of this data
@type detectedMobyleType: L{MobyleType} instance
@return: the casted value and the mobyleType describing this data (with the effective DataFormat)
for datatype which have not dataFormat (boolean , integer, ... )
the MobyleType returned is the same as the AcceptedMobyleType.
@rtype: ( value any type , MobyleType instance )
@raise UseValueError: if the cast failed
"""
realMobyleType = MobyleType( self )
return ( "DataTypeTemplate convert: " + str( value ) , realMobyleType )
def detect( self , value ):
mt = MobyleType( self )
return mt
def validate( self, param ):
"""
do type controls. if the value in the param pass the controls
return True, False otherwise.
@rtype: boolean
"""
return "DataTypeTemplate validate"
class BooleanDataType( DataType ):
"""
"""
def convert( self , value , acceptedMobyleType , detectedMobyleType = None , paramFile= False ):
"""
cast the value to a Boolean.
The values: "off", "false", "0" or '' (case insensitive) are false,
all others values are True.
@param value: the value provided by the User for this parameter
@type value: String
@param acceptedMobyleType: the MobyleType accepted by this service parameter
@type acceptedMobyleType: L{MobyleType} instance
@param detectedMobyleType: the MobyleType discribing this data
@type detectedMobyleType: L{MobyleType} instance
@return: the value converted to Boolean, and a MobyleType discribing this value
@rtype: tuple ( boolean , MobyleType instance )
"""
if value is None:
# in html form boolean appear as checkbox
# if the checkbox is not selected
# the parameter is not send in the request
return ( False , acceptedMobyleType )
if isinstance( value , BooleanType ):
return ( value , acceptedMobyleType )
elif isinstance( value , StringTypes ):
value = value.lower()
if value in [ "off", "false", "0", "", "''", '""' ]:
return ( False , acceptedMobyleType )
elif value in [ "on", "true", "1" ]:
return ( True , acceptedMobyleType )
else:
msg = "Invalid value: " + str( value ) + " is not a boolean."
raise UserValueError( msg = msg )
def detect( self , value ):
mt = MobyleType( self )
return mt
def validate( self, param ):
"""
do type controls. if the value is True or False or None return True,
otherwise return False..
"""
value = param.getValue()
if value == True or value == False:
return True
else:
return False
class IntegerDataType( DataType ):
def convert( self , value , acceptedMobyleType , detectedMobyleType = None , paramFile= False ):
"""
Try to cast the value to Integer. the allowed values are digits
and strings.
@param value: the value provided by the User for this parameter
@type value: string
@param acceptedMobyleType: the MobyleType accepted by this service parameter
@type acceptedMobyleType: L{MobyleType} instance
@param detectedMobyleType: the MobyleType discribing this data
@type detectedMobyleType: L{MobyleType} instance
@return: the value converted to Integer and the mobyleType discribing this value.
@rtype: ( int , MobyleType instance )
@raise UserValueError: if the cast fails.
Unlike python, this method convert "8.0" to 8 and
raise a UserValueError if you try to convert 8.2 .
"""
if value is None:
return ( None , acceptedMobyleType )
#type controls
# int("8.0") failed and a ValueError is raised
# int(8.1) return 8
try:
f= float( value )
i = int( f )
if ( (f - i) == 0):
return ( i , acceptedMobyleType )
else:
msg = "\"%s\" : this parameter must be an integer" %value
raise UserValueError( msg = msg)
except OverflowError:
raise UserValueError( msg = "this value is too big" )
except ( ValueError , TypeError ):
msg = "\"%s\" : this parameter must be an integer" %value
raise UserValueError( msg = msg)
def detect( self , value ):
mt = MobyleType( self )
return mt
def validate( self, param ):
"""
@return True if the value is an integer, False othewise.
"""
value = param.getValue()
if value is None:
return True
try:
int( value )
except ( TypeError , ValueError ):
return False
class FloatDataType( DataType ):
def convert( self , value , acceptedMobyleType , detectedMobyleType = None , paramFile= False ):
"""
Try to cast the value to Float.
@param value: the value provided by the User for this parameter
@type value:
@param acceptedMobyleType: the MobyleType accepted by this service parameter
@type acceptedMobyleType: L{MobyleType} instance
@param detectedMobyleType: the MobyleType discribing this data
@type detectedMobyleType: L{MobyleType} instance
@return: the value converted to Float
@rtype: float
"""
if value is None:
return ( None , acceptedMobyleType )
try:
return ( float( value ) , acceptedMobyleType )
except ( ValueError, TypeError ):
msg = str( value ) + " this parameter must be a Float"
raise UserValueError( msg = msg )
def detect( self , value ):
mt = MobyleType( self )
return mt
def validate( self, param ):
"""
@return: True if the value is a float, False othewise.
@rtype: boolean
"""
value = param.getValue()
if value is None:
return True
try:
float( value )
except ( ValueError , TypeError ):
return False
class StringDataType( DataType ):
def convert( self , value , acceptedMobyleType , detectedMobyleType = None , paramFile= False ):
"""
Try to cast the value to String.
@param value: the value provided by the User for this parameter
@type value:
@return: the value converted to String.
@rtype: String
@param acceptedMobyleType: the MobyleType accepted by this service parameter
@type acceptedMobyleType: L{MobyleType} instance
@param detectedMobyleType: the MobyleType discribing this data
@type detectedMobyleType: L{MobyleType} instance
@raise UserValueError: if the cast fails.
"""
if value is None:
return ( None , acceptedMobyleType )
#type controls
try:
value = str( value ).encode('ascii')
except ValueError :
raise UserValueError( msg = "should be an (ascii) string" )
#strings with space are allowed, but if the string will appear
#as shell instruction it must be quoted
if value.find(' ') != -1 and not paramFile:
value = "'%s'" % value
return ( value , acceptedMobyleType )
def detect( self , value ):
mt = MobyleType( self )
return mt
def validate( self, param ):
"""
@return: True if the value is a string and doesnot contain dangerous characters.
( allowed characters: the words , space, ' , - , + , and dot if is not followed by another dot
and eventually surrounded by commas)
@rtype: boolean
@raise UserValueError: if the value does not statisfy security regexp.
"""
value = param.getValue()
if value is None:
return True
#allowed characters:
#the words , space, ' , - , + , and dot if is not followed by another dot
#and eventually surrounded by commas
reg = "(\w|\ |-|\+|,|@|\.(?!\.))+"
if re.search( "^(%s|'%s')$" % (reg, reg) , value ) :
return True
else:
msg = "this value: \"" + str( value ) + "\" , is not allowed"
raise UserValueError( parameter = param , msg = msg )
class ChoiceDataType( StringDataType ):
#the values of ChoiceDataType are literals thus they are String
def convert( self , value , acceptedMobyleType , detectedMobyleType = None , paramFile= False ):
"""
The values of ChoiceDataType are literals thus this method try to cast
the value to string.
@param value: the value provided by the User for this parameter
@type value:
@param acceptedMobyleType: the MobyleType accepted by this service parameter
@type acceptedMobyleType: L{MobyleType} instance
@param detectedMobyleType: the MobyleType discribing this data
@type detectedMobyleType: L{MobyleType} instance
@return: the value converted in String
@rtype: string
"""
if value is None:
return ( None , acceptedMobyleType )
try:
value = str( value )
if hasattr( acceptedMobyleType , '_undefValue' ) and value == acceptedMobyleType._undefValue :
return ( None , acceptedMobyleType )
else:
return ( value, acceptedMobyleType )
except ValueError:
msg = " this parameter is a Choice its value should be a String"
raise UserValueError( msg = msg )
def detect( self , value ):
mt = MobyleType( self )
return mt
def validate( self, param ):
"""
@return: True if the value is valid. that's mean the value
should be a string among the list defined in the xml.
otherwise a MobyleError is raised.
@rtype: boolean
@param value: a value from a Choice parameter
@type value: Choice value
@raise UserValueError: if the value is not a string or is not among the
list defined in the xml vlist.
"""
paramName = param.getName()
value = param.getValue()
if param.hasVlist() :
authorizedValues = param.getVlistValues()
elif param.hasFlist() :
authorizedValues = param.getFlistValues()
else:
msg = "%s a Choice must have a flist or vlist" %( paramName )
c_log.error( msg )
raise MobyleError , msg
if value is None or value in authorizedValues:
return True
else:
logMsg = "Unauthorized value for the parameter : %s : authorized values = %s : provided value = %s" %( paramName ,
authorizedValues ,
value
)
c_log.error( logMsg )
msg = "Unauthorized value for the parameter : %s" %( paramName )
raise UserValueError( parameter = param , msg = msg )
class MultipleChoiceDataType( StringDataType ):
def convert( self , value , acceptedMobyleType , detectedMobyleType = None , paramFile= False, separator = None):
"""
The MutipleChoiceDataType value are literals thus this method try to cast
the value to a list of string.
@param value: the values provided by the User for this parameter
@type value: list
@param acceptedMobyleType: the MobyleType accepted by this service parameter
@type acceptedMobyleType: L{MobyleType} instance
@param detectedMobyleType: the MobyleType describing this data
@type detectedMobyleType: L{MobyleType} instance
@return: a string based on each selected value and joined by the separator.
@rtype: String .
@raise UserValueError: if the value can't be converted to a string.
"""
if value is None:
return ( None , acceptedMobyleType )
sep = separator if separator is not None else ''
if hasattr( acceptedMobyleType , '_undefValue' ) and value == acceptedMobyleType._undefValue :
return ( None , acceptedMobyleType )
else:
try:
values = [ str( elem ) for elem in value ]
except ValueError:
msg = "this parameter is a MultipleChoice its all values must be Strings" %value
raise UserValueError( msg = msg )
return ( sep.join(values) , acceptedMobyleType )
def detect( self , value ):
mt = MobyleType( self )
return mt
def validate( self, param ):
#values are stored as string in evaluator
#the string is computed by service.setValue()
#the string is return by getValue and used as is in ComandBuilder
userValues = param.getValue() #it's a string
if userValues is None:
return True
sep = param.getSeparator()
#we must retransform the string in a list to check if each
#element is in the list of authorized values
if sep == '':
userValues = [ i for i in userValues ]
else:
userValues = userValues.split( sep )
authorizedValues = param.getVlistValues()
undef_value = param.getListUndefValue()
for value in userValues:
if value not in authorizedValues and value != param.getListUndefValue():
msg = "the value %s is not allowed (allowed values: %s)" % (
str( value ) ,
str( param.getVlistValues() )
)
raise UserValueError( parameter = param , msg = msg )
return True
class AbstractFileDataType(DataType):
"""
AbstractFileDataType is an abstract class that centralizes the
code which is common to text files (AbstractTextDataType) and
binary files (BinaryDataType)
"""
def isFile( self ):
return True
@classmethod
def supportedFormat( cls ):
"""
@return: the list supported by the format detector
@rtype: list of string
"""
uniq_formats = []
for converter in _cfg.dataconverter( cls.__name__[:-8] ):
for f in converter.detectedFormat():
if f not in uniq_formats:
uniq_formats.append( f )
return uniq_formats
@classmethod
def supportedConversion( cls ):
"""
@return: the list of dataFormat conversion available.
@rtype: list of tuple [ (string input format, string output formt) , ... ]
"""
uniq_conversion = []
for converter in _cfg.dataconverter( cls.__name__[:-8] ):
for f in converter.convertedFormat():
if f not in uniq_conversion:
uniq_conversion.append( f )
return uniq_conversion
def detect( self , value ):
"""
detects the format of the sequence(s) contained in fileName
@param value: the src object and the filename in the src of the data to detect
@type value: tuple ( session/Job/MobyleJob instance , string filename )
@return: a tuple of the detection run information:
- the detected format,
- the detected items number,
- program name used for the detection.
"""
if value is None:
return None
if len( value ) == 2 :
src , srcFileName = value
else:
raise MobyleError ,"value must be a tuple of 2 elements: ( Job/MobyleJob/JobState or Session instance , Job/MobyleJob/JobState or Session instance , srcFileName )"
if src and not srcFileName :
raise MobyleError , "if src is specified, srcFileName must be also specified"
absFileName = os.path.join( src.getDir() , srcFileName )
all_converters = _cfg.dataconverter( self.__class__.__name__[:-8] )
for converter in all_converters:
detected_format , seq_nb = converter.detect( absFileName )
prg = converter.program_name
if detected_format:
detected_mt = MobyleType( self , dataFormat = detected_format , format_program = prg , item_nb = seq_nb)
return detected_mt
return MobyleType( self ) #no dataFormat have been detected
def convert( self , value ,acceptedMobyleType , detectedMobyleType = None, paramFile= False):
"""
convert the sequence contain in the file fileName in the rigth format
throws an UnsupportedFormatError if the output format is not supported
or a MobyleError if something goes wrong during the conversion.
@param value: is a tuple ( src , srcFileName)
- srcfilename is the name of the file to convert in the src
- src must be a L{Job} instance the conversion are perform only by jobs (not session) .
@type value: ( L{Job} instance dest, L{Job} instance, src)
@return: the fileName ( basename ) of the sequence file and the effective MobyleType associated to this
value
@rtype: ( string fileName , MobyleType instance )
@raise UnSupportedFormatError: if the data cannot be converted in any suitable format
"""
if value is None:
return None
if len( value ) == 2 :
src , srcFileName = value
else:
raise MobyleError ,"value must be a tuple of 2 elements: ( Job/MobyleJob/JobState or Session instance , Job/MobyleJob/JobState or Session instance , srcFileName )"
if src and not srcFileName :
raise MobyleError , "if src is specified, srcFileName must be also specified"
absFileName = os.path.join( src.getDir() , srcFileName )
all_converters = _cfg.dataconverter( self.__class__.__name__[:-8] )
in_format = detectedMobyleType.getDataFormat()
if not all_converters:
fileName = safeFileName( absFileName )
if detectedMobyleType :
mt = detectedMobyleType
else:
mt = MobyleType( self )
#filename is a basename
return ( fileName , mt )
else:
def unknow_converter( in_format , converters ):
result = None
for converter in converters:
try:
result = fixed_converter( in_format , converter )
except UnSupportedFormatError:
continue
if result is not None:
break
#if I cannot find any suitable converter result is None
return result
def fixed_converter( in_format , converter ):
allowed_conversions = converter.convertedFormat()
for out_format , force in acceptedMobyleType.getAcceptedFormats():
if ( in_format , out_format ) in allowed_conversions:
try:
outFileName = converter.convert( absFileName , out_format , inputFormat = in_format )
outFileName = os.path.basename( outFileName )
except UnSupportedFormatError, err:
raise UnSupportedFormatError( msg = "a problem occurred during the data conversion : "+str( err ) )
converted_mt = MobyleType( self , dataFormat = out_format , format_program = converter.program_name )
return ( outFileName , converted_mt )
#it's not a suitable converter
return None
if detectedMobyleType.format_program is None:
result = unknow_converter( in_format , all_converters )
else:
for converter in all_converters:
if converter.program_name == detectedMobyleType.format_program :
detector_used = converter
break
if detector_used is None:
raise MobyleError( "unable to find %s converter" % detectedMobyleType.format_program )
result = fixed_converter( in_format , detector_used )
if result is None:# the detector_used is not suitable for the conversion
result= unknow_converter( in_format , [ c for c in all_converters if c != detector_used ] )
if result is None:
raise UnSupportedFormatError( "unable to convert %s in %s sequence format" %( in_format ,
[ f[0] for f in acceptedMobyleType.getAcceptedFormats() ]
) )
else:
return result #( outFileName , converted_mt )
def validate( self , param ):
"""
"""
value = param.getValue()
if param.isout():
if value is not None : #un parametre isout ne doit pas etre modifier par l'utilisateur
return False
else:
#####################################################
# #
# check if the Parameter have a secure filenames #
# #
#####################################################
try:
debug = param.getDebug()
if debug > 1:
b_log.debug( "check if the Parameter have a secure filename" )
#getFilenames return a list of strings representing a unix file mask which is the result of a code evaluation
#getFilenames return None if there is no mask for a parameter.
filenames = param.getFilenames( )
for filename in filenames :
if filename is None:
continue
mask = safeMask( filename )
if debug > 1:
b_log.debug( "filename= %s safeMask = %s"%(filename, mask))
if not mask or mask != filename :
msg = "The Parameter:%s, have an unsecure filenames value: %s " %( param.getName() ,
filename )
c_log.error("Mobyle Internal Server Error")
if debug == 0:
c_log.critical( "%s : %s : %s" %( self._service.getName(),
self._job.getKey() ,
msg
)
)
raise MobyleError , "Mobyle Internal Server Error"
else:
if debug > 1:
b_log.debug( "filename = %s ...........OK" % filename )
except UnDefAttrError :
b_log.debug("no filenames")
else:
if value is None:
#un infile Text ne peut pas avoir de vdef mais peut il etre a None?
#=> oui s'il n'est pas obligatoire
return True
else:
return os.path.exists( param.getValue() )
class AbstractTextDataType( AbstractFileDataType ):
def head( self , data ):
return data[ 0 : 50 ]
def cleanData( self , data ):
"""
convert the data in right encoding and replace windows end of line by unix one.
"""
# trying to guess the encoding, before converting the data to ascii
try:
# trying ascii
data = unicode(data.decode('ascii','strict'))
except:
try:
# utf8 codec with BOM support
data = unicode(data,'utf_8_sig')
except:
try:
# utf16 (default Windows Unicode encoding)
data = unicode(data,'utf_16')
except:
# latin1
data = unicode(data,'latin1')
# converting the unicode data to ascii
data = data.encode('ascii','replace')
return re.sub( "\r\n|\r|\n" , '\n' , data )
def toFile( self , data , dest , destFileName , src , srcFileName ):
"""
Write file (of user data) in dest directory .
@param fileName:
@type fileName: string
@param data: the content of the file
@type data: string
@param dest: the object in which the data will be copied
@type dest: Job, Session object
@param src: the object where the data can be found
@type src: Job, Session object
@param srcFileName: the file namae of the data in the src ( basename )
@type srcFileName: string
@return: the name of the created file (the basename)
@rtype: string
@raise: L{UserValueError} when filename is not allowed (for security reason)
@raise: L{MobyleError} if an error occured during the file creation
"""
try:
destSafeFileName = safeFileName( destFileName )
except UserValueError, err:
raise UserValueError( msg = "this value : %s is not allowed for a file name, please change it" % destFileName )
abs_DestFileName= os.path.join( dest.getDir() , destSafeFileName )
# if the user upload 2 files with the same basename safeFileName
# return the same safeFileName
# add an extension to avoid _toFile erase the existing file.
ext = 1
completeName = abs_DestFileName.split( '.' )
base = completeName[0]
suffixe = '.'.join( completeName[1:] )
while os.path.exists( abs_DestFileName ):
abs_DestFileName = base + '.' + str( ext ) + '.' + suffixe
ext = ext + 1
if src:
if src.isLocal():
try:
srcSafeFileName = safeFileName( srcFileName )
except UserValueError, err:
raise UserValueError( msg = "this value : %s is not allowed for a file name, please change it" % srcFileName )
#the realpath is because if the abs_SrcFileName is a soft link ( some results are ) the
# hardlink point to softlink and it causse ane error : no such file
abs_SrcFileName = os.path.realpath( os.path.join( src.getDir() , srcSafeFileName ) )
try:
os.link( abs_SrcFileName , abs_DestFileName )
except OSError :
#if the src and dest are not on the same device
#an OSError: [Errno 18] Invalid cross-device link , is raised
try:
shutil.copy( abs_SrcFileName , abs_DestFileName )
except IOError ,err:
# I don't know - neither the service ( if it exists )
# - nor the job or session ID
# I keep the Job or the Session to log this error
msg = "can't copy data from %s to %s : %s" %( abs_SrcFileName ,
abs_DestFileName ,
err )
c_log.error( msg )
raise MobyleError , "can't copy data : "+ str(err)
else: #src is a job , jobState , MobyleJob instance ( Session is always Local )
data = src.getOutputFile( srcFileName )
try:
f = open( abs_DestFileName , 'w' )
f.write( data )
f.close()
except IOError ,err:
msg = "unable to write data from %s to %s: %s"%(src , dest , err )
c_log.error( msg )
raise MobyleError , msg
else:
try:
clean_content = self.cleanData(data)
except Exception, err:
msg = "error when cleaning file : " + abs_DestFileName + str( err )
c_log.critical(msg, exc_info=True)
raise MobyleError, msg
try:
fh = open(abs_DestFileName, "w")
fh.write(clean_content)
fh.close()
except IOError, err:
msg = "error when creating file : " + abs_DestFileName + str(err)
raise MobyleError, msg
size = os.path.getsize(abs_DestFileName)
return os.path.basename(abs_DestFileName), size
class TextDataType( AbstractTextDataType ):
# this trick is to avoid that SequenceDataType is a subclass of TextDataType
pass
class ReportDataType( AbstractTextDataType ):
pass
class BinaryDataType( AbstractFileDataType ):
def head( self , data ):
return 'Binary data'
def cleanData( self, data ):
"""
prepare data prior to write it on a disk
@param data:
@type data:a buffer
"""
return data
def toFile( self , data , dest , destFileName , src , srcFileName ):
"""
Write file (of user data) in the working directory .
@param fileName:
@type fileName: string
@param content: the content of the file
@type content: string
@return: the name ( absolute path ) of the created file ( could be different from the arg fileName )
@rtype: string
@call: L{MobyleJob._fillEvaluator}
"""
try:
destSafeFileName = safeFileName( destFileName )
except UserValueError, err:
raise UserValueError( msg = "this value : %s is not allowed for a file name, please change it" % destFileName )
abs_DestFileName = os.path.join( dest.getDir() , destSafeFileName )
# if the user upload 2 files with the same basename safeFileName
# return the same safeFileName
# add an extension to avoid _toFile to erase the existing file.
ext = 1
completeName = abs_DestFileName.split( '.' )
base = completeName[0]
suffixe = '.'.join( completeName[1:] )
while os.path.exists( abs_DestFileName ):
abs_DestFileName = base + '.' + str( ext ) + '.' + suffixe
ext = ext + 1
if src:
if src.isLocal():
try:
srcSafeFileName = safeFileName( srcFileName )
except UserValueError, err:
raise UserValueError( msg = "this value : %s is not allowed for a file name, please change it" % srcFileName )
#the realpath is because if the abs_SrcFileName is a soft link ( some results are ) the
#hardlink point to softlink and it cause an error : no such file
abs_SrcFileName = os.path.realpath( os.path.join( src.getDir() , srcSafeFileName ) )
try:
os.link( abs_SrcFileName , abs_DestFileName )
except OSError :
#if the src and dest are not on the same device
#an OSError: [Errno 18] Invalid cross-device link , is raised
try:
shutil.copy( abs_SrcFileName , abs_DestFileName )
except IOError ,err:
# je ne connais - ni le service (s'il existe)
# - ni le l' ID du job ou de la session
# donc je laisse le soin au Job ou la session a logger l'erreur
msg = "can't copy data from %s to %s : %s" %( abs_SrcFileName ,
abs_DestFileName ,
err )
raise MobyleError , "can't copy data : "+ str(err)
else: #src is a job , jobState , MobyleJOb instance ( session is Local )
data = src.getOutputFile( srcFileName )
try:
f = open( abs_DestFileName , 'wb' )
f.write( data )
f.close()
except IOError ,err:
pass
else:
try:
fh = open( abs_DestFileName , "wb" )
fh.write( data )
fh.close()
except IOError , err:
# je ne connais - ni le service (s'il existe)
# - ni le l' ID du job ou de la session
# donc je laisse le soin au Job ou la session a logger l'erreur
msg = "error when creating file %s: %s" %( os.path.basename( abs_DestFileName ) , err )
raise MobyleError , msg
size = os.path.getsize( abs_DestFileName )
return os.path.basename( abs_DestFileName ) , size
class FilenameDataType( DataType ):
def convert( self , value , acceptedMobyleType , detectedMobyleType = None , paramFile= False ):
"""
@param acceptedMobyleType: the MobyleType accepted by this service parameter
@type acceptedMobyleType: L{MobyleType} instance
@param detectedMobyleType: the MobyleType describing this data
@type detectedMobyleType: L{MobyleType} instance
"""
if value is None:
return ( None , acceptedMobyleType )
#raise UserValueError( parameter = param , msg= " this parameter must be a String" )
#fileName = safeFileName( value )
return ( value , acceptedMobyleType )
def detect( self , value ):
mt = MobyleType( self )
return mt
def validate( self, param ):
value = param.getValue()
if value is None :
return True
safefileName = safeFileName( value )
if safefileName != value:
msg = "invalid value: %s : the followings characters \:/ ;` {} are not allowed" %( value )
raise UserValueError( parameter = param , msg = msg )
else:
return True
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