1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
|
__version__ = '0.1'
import os
import unittest
import numpy as np
import json
import datetime
from bson.objectid import ObjectId
from enum import Enum
# from . import __version__ as tests_version
from monty.json import MSONable, MontyEncoder, MontyDecoder, jsanitize
from monty.json import _load_redirect
test_dir = os.path.join(os.path.dirname(os.path.abspath(__file__)), "test_files")
class GoodMSONClass(MSONable):
def __init__(self, a, b, c, d=1, *values, **kwargs):
self.a = a
self.b = b
self._c = c
self._d = d
self.values = values
self.kwargs = kwargs
def __eq__(self, other):
return (self.a == other.a and self.b == other.b and
self._c == other._c and self._d == other._d and
self.kwargs == other.kwargs and self.values == other.values)
class GoodNestedMSONClass(MSONable):
def __init__(self, a_list, b_dict, c_list_dict_list, **kwargs):
assert isinstance(a_list, list)
assert isinstance(b_dict, dict)
assert isinstance(c_list_dict_list, list)
assert isinstance(c_list_dict_list[0], dict)
first_key = list(c_list_dict_list[0].keys())[0]
assert isinstance(c_list_dict_list[0][first_key], list)
self.a_list = a_list
self.b_dict = b_dict
self._c_list_dict_list = c_list_dict_list
self.kwargs = kwargs
class EnumTest(MSONable, Enum):
a = 1
b = 2
class MSONableTest(unittest.TestCase):
def setUp(self):
self.good_cls = GoodMSONClass
class BadMSONClass(MSONable):
def __init__(self, a, b):
self.a = a
self.b = b
def as_dict(self):
d = {"init": {'a': self.a, 'b': self.b}}
return d
self.bad_cls = BadMSONClass
class BadMSONClass2(MSONable):
def __init__(self, a, b):
self.a = a
self.c = b
self.bad_cls2 = BadMSONClass2
class AutoMSON(MSONable):
def __init__(self, a, b):
self.a = a
self.b = b
self.auto_mson = AutoMSON
def test_to_from_dict(self):
obj = self.good_cls("Hello", "World", "Python")
d = obj.as_dict()
self.assertIsNotNone(d)
self.good_cls.from_dict(d)
jsonstr = obj.to_json()
d = json.loads(jsonstr)
self.assertTrue(d["@class"], "GoodMSONClass")
obj = self.bad_cls("Hello", "World")
d = obj.as_dict()
self.assertIsNotNone(d)
self.assertRaises(TypeError, self.bad_cls.from_dict, d)
obj = self.bad_cls2("Hello", "World")
self.assertRaises(NotImplementedError, obj.as_dict)
obj = self.auto_mson(2, 3)
d = obj.as_dict()
objd = self.auto_mson.from_dict(d)
def test_unsafe_hash(self):
GMC = GoodMSONClass
a_list = [GMC(1, 1.0, "one"), GMC(2, 2.0, "two")]
b_dict = {"first": GMC(3, 3.0, "three"), "second": GMC(4, 4.0, "four")}
c_list_dict_list = [
{
"list1": [
GMC(5, 5.0, "five"),
GMC(6, 6.0, "six"),
GMC(7, 7.0, "seven"),
],
"list2": [GMC(8, 8.0, "eight")],
},
{
"list3": [
GMC(9, 9.0, "nine"),
GMC(10, 10.0, "ten"),
GMC(11, 11.0, "eleven"),
GMC(12, 12.0, "twelve"),
],
"list4": [GMC(13, 13.0, "thirteen"), GMC(14, 14.0, "fourteen")],
"list5": [GMC(15, 15.0, "fifteen")],
},
]
obj = GoodNestedMSONClass(
a_list=a_list, b_dict=b_dict, c_list_dict_list=c_list_dict_list
)
self.assertEqual(
a_list[0].unsafe_hash().hexdigest(),
"ea44de0e2ef627be582282c02c48e94de0d58ec6",
)
self.assertEqual(
obj.unsafe_hash().hexdigest(), "44204c8da394e878f7562c9aa2e37c2177f28b81"
)
@unittest.skip("Test Skipped on Debian.")
def test_version(self):
obj = self.good_cls("Hello", "World", "Python")
d = obj.as_dict()
self.assertEqual(d["@version"], tests_version)
def test_nested_to_from_dict(self):
GMC = GoodMSONClass
a_list = [GMC(1, 1.0, "one"),
GMC(2, 2.0, "two")]
b_dict = {"first": GMC(3, 3.0, "three"),
"second": GMC(4, 4.0, "four")}
c_list_dict_list = [{"list1": [GMC(5, 5.0, "five"),
GMC(6, 6.0, "six"),
GMC(7, 7.0, "seven")],
"list2": [GMC(8, 8.0, "eight")]},
{"list3": [GMC(9, 9.0, "nine"),
GMC(10, 10.0, "ten"),
GMC(11, 11.0, "eleven"),
GMC(12, 12.0, "twelve")],
"list4": [GMC(13, 13.0, "thirteen"),
GMC(14, 14.0, "fourteen")],
"list5": [GMC(15, 15.0, "fifteen")]}]
obj = GoodNestedMSONClass(a_list=a_list,
b_dict=b_dict,
c_list_dict_list=c_list_dict_list)
obj_dict = obj.as_dict()
obj2 = GoodNestedMSONClass.from_dict(obj_dict)
self.assertTrue([obj2.a_list[ii] == aa for ii, aa in enumerate(obj.a_list)])
self.assertTrue([obj2.b_dict[kk] == val for kk, val in obj.b_dict.items()])
self.assertEqual(len(obj.a_list), len(obj2.a_list))
self.assertEqual(len(obj.b_dict), len(obj2.b_dict))
s = json.dumps(obj_dict)
obj3 = json.loads(s, cls=MontyDecoder)
self.assertTrue([obj2.a_list[ii] == aa for ii, aa in enumerate(obj3.a_list)])
self.assertTrue([obj2.b_dict[kk] == val for kk, val in obj3.b_dict.items()])
self.assertEqual(len(obj3.a_list), len(obj2.a_list))
self.assertEqual(len(obj3.b_dict), len(obj2.b_dict))
s = json.dumps(obj, cls=MontyEncoder)
obj4 = json.loads(s, cls=MontyDecoder)
self.assertTrue([obj4.a_list[ii] == aa for ii, aa in enumerate(obj.a_list)])
self.assertTrue([obj4.b_dict[kk] == val for kk, val in obj.b_dict.items()])
self.assertEqual(len(obj.a_list), len(obj4.a_list))
self.assertEqual(len(obj.b_dict), len(obj4.b_dict))
def test_enum_serialization(self):
e = EnumTest.a
d = e.as_dict()
e_new = EnumTest.from_dict(d)
self.assertEqual(e_new.name, e.name)
self.assertEqual(e_new.value, e.value)
class JsonTest(unittest.TestCase):
def test_as_from_dict(self):
obj = GoodMSONClass(1, 2, 3, hello="world")
s = json.dumps(obj, cls=MontyEncoder)
obj2 = json.loads(s, cls=MontyDecoder)
self.assertEqual(obj2.a, 1)
self.assertEqual(obj2.b, 2)
self.assertEqual(obj2._c, 3)
self.assertEqual(obj2._d, 1)
self.assertEqual(obj2.kwargs, {"hello": "world", "values": []})
obj = GoodMSONClass(obj, 2, 3)
s = json.dumps(obj, cls=MontyEncoder)
obj2 = json.loads(s, cls=MontyDecoder)
self.assertEqual(obj2.a.a, 1)
self.assertEqual(obj2.b, 2)
self.assertEqual(obj2._c, 3)
self.assertEqual(obj2._d, 1)
listobj = [obj, obj2]
s = json.dumps(listobj, cls=MontyEncoder)
listobj2 = json.loads(s, cls=MontyDecoder)
self.assertEqual(listobj2[0].a.a, 1)
def test_datetime(self):
dt = datetime.datetime.now()
jsonstr = json.dumps(dt, cls=MontyEncoder)
d = json.loads(jsonstr, cls=MontyDecoder)
self.assertEqual(type(d), datetime.datetime)
self.assertEqual(dt, d)
# Test a nested datetime.
a = {'dt': dt, "a": 1}
jsonstr = json.dumps(a, cls=MontyEncoder)
d = json.loads(jsonstr, cls=MontyDecoder)
self.assertEqual(type(d["dt"]), datetime.datetime)
def test_numpy(self):
x = np.array([1, 2, 3], dtype="int64")
self.assertRaises(TypeError, json.dumps, x)
djson = json.dumps(x, cls=MontyEncoder)
d = json.loads(djson)
self.assertEqual(d["@class"], "array")
self.assertEqual(d["@module"], "numpy")
self.assertEqual(d["data"], [1, 2, 3])
self.assertEqual(d["dtype"], "int64")
x = json.loads(djson, cls=MontyDecoder)
self.assertEqual(type(x), np.ndarray)
x = np.min([1, 2, 3]) > 2
self.assertRaises(TypeError, json.dumps, x)
x = np.array([1+1j, 2+1j, 3+1j], dtype="complex64")
self.assertRaises(TypeError, json.dumps, x)
djson = json.dumps(x, cls=MontyEncoder)
d = json.loads(djson)
self.assertEqual(d["@class"], "array")
self.assertEqual(d["@module"], "numpy")
self.assertEqual(d["data"], [[1.0,2.0,3.0],[1.0,1.0,1.0]])
self.assertEqual(d["dtype"], "complex64")
x = json.loads(djson, cls=MontyDecoder)
self.assertEqual(type(x), np.ndarray)
self.assertEqual(x.dtype, "complex64")
def test_objectid(self):
oid = ObjectId('562e8301218dcbbc3d7d91ce')
self.assertRaises(TypeError, json.dumps, oid)
djson = json.dumps(oid, cls=MontyEncoder)
x = json.loads(djson, cls=MontyDecoder)
self.assertEqual(type(x), ObjectId)
def test_jsanitize(self):
# clean_json should have no effect on None types.
d = {"hello": 1, "world": None}
clean = jsanitize(d)
self.assertIsNone(clean["world"])
self.assertEqual(json.loads(json.dumps(d)), json.loads(json.dumps(
clean)))
d = {"hello": GoodMSONClass(1, 2, 3)}
self.assertRaises(TypeError, json.dumps, d)
clean = jsanitize(d)
self.assertIsInstance(clean["hello"], str)
clean_strict = jsanitize(d, strict=True)
self.assertEqual(clean_strict["hello"]["a"], 1)
self.assertEqual(clean_strict["hello"]["b"], 2)
d = {"dt": datetime.datetime.now()}
clean = jsanitize(d)
self.assertIsInstance(clean["dt"], str)
clean = jsanitize(d, allow_bson=True)
self.assertIsInstance(clean["dt"], datetime.datetime)
d = {"a": ["b", np.array([1, 2, 3])],
"b": ObjectId.from_datetime(datetime.datetime.now())}
clean = jsanitize(d)
self.assertEqual(clean["a"], ['b', [1, 2, 3]])
self.assertIsInstance(clean["b"], str)
rnd_bin = bytes(np.random.rand(10))
d = {"a": bytes(rnd_bin)}
clean = jsanitize(d, allow_bson=True)
self.assertEqual(clean["a"], bytes(rnd_bin))
self.assertIsInstance(clean["a"], bytes)
def test_redirect(self):
MSONable.REDIRECT["test_json"] = {
"test_class": {"@class": "GoodMSONClass", "@module": "test_json"}
}
d = {
"@class": "test_class",
"@module": "test_json",
"a": 1,
"b": 1,
"c": 1,
}
obj = json.loads(json.dumps(d), cls=MontyDecoder)
self.assertEqual(type(obj), GoodMSONClass)
d["@class"] = "not_there"
obj = json.loads(json.dumps(d), cls=MontyDecoder)
self.assertEqual(type(obj), dict)
def test_redirect_settings_file(self):
data = _load_redirect(os.path.join(test_dir, "test_settings.yaml"))
self.assertEqual(data, {'old_module': {'old_class': {'@class': 'new_class', '@module': 'new_module'}}})
if __name__ == "__main__":
unittest.main()
|
