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Upstream provides binary files without sources for:
* tests/big.bam.csi
* tests/empty-tids.bam.bai
* tests/ovl.bam.bai
* tests/nanopore.bam
* tests/nanopore.bam.bai
* tests/ovl.bam
* tests/overlapping-pairs.bam.bai
* tests/overlapping-pairs.bam
* tests/big.bam
* tests/empty-tids.bam
These have been converted to corresponding text (.sam) files with command:
* samtools view -h -o <out>.sam <in>.bam
And the corresponding *.sam files are added to: debian/missing-sources
They can be generated back with the following commands:
* cat debian/<sam-file> | samtools view -Sb - > tests/<corresponding-bam>
* samtools index <bam-files>
These commands are also being run in debian/rules since these binaries are needed for autopkgtests.
-- Nilesh Patra <npatra974@gmail.com> Sun, 03 Nov 2020 14:38:35 +0530
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